Parental gene:

BCCIP, ENSOCUG00000008761

Aliases:None
Description:BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:978]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL018726:311167..324940(+)


>ENSOCUG00000008761
ATGGCGTCCAGGTCCAAGCGGCGAGCAGTCGGGAATGGGGTCCCGCGGCCGCCTGGCGCCCCGGTCCAGCGCCGGGAAAG
GGGGATGGATAATGTTGATTCGCGAGAAGGACGAACCGGAAGGTCAGAGAGAAAAAGAAACCCAAGACACGAGGTGTATT
TACAGGAAGTGAATATTGATTTTGAAGCTTACTCCATCTCAGATAATGATTATGACGGAATTAAGAAATTACTGCAGCAG
CTGTTCCTAAAGGCTCCTGTGAACACGGCAGAGCTAACAGATCTCTTGATTCAGCAGAACCATGTTGGGAGTGTGATTAA
GCAAACAGACATTTCAGAAGACAGCGATGATGATATGGATGAAGATGAGATTTTCGGCTTCATAAGCCTTTTAAATTTAA
CCGAGAGAAAGGGTACCCCGTGTGCCGAGCAAATCAAAGAGCTGGTTCTAAGCTGCTGTGAGAAGAGCTGTGAGAAGAGT
GTGGTGGAGCAGCTGGACGCGCTCCTGCAGGACGCCAGCAAGCCCGTGGGCTTCCTCCTGAGCGAGAGGCTCATGAACGT
CCCCCCGCAGGTTGCCCTGCCCATGCACCAGCAGCTGCAGAAAGAACTCGCGGAGGCACACAAGACCAGTAAGCCGTGCG
GGAAGTGCTGCTTCTACCTGCTGATCAGTAAGACGTTTGTGGAAGCAGGAAAAGGCAGTTCCAAGAAGAAACGGAGCAGC
CAAAAGAAAGAAGAGTTAATGTTTGCAAACGCAGAGGAAGAATTTTTCTATGAGAAGGCAGTCCTGAAGTTCAGCTACTC
GGTGCAGGAGGACCGCGACACCTGTCTGGGAGGCAGATGGTCTTTCGATGACGTTCCCATGAAGCCCATGAGGACTGTGA
TGGTGATTCCAGGCGACAAGATGGACGAGATCATGGATAAACTGAAAGAACATCTGTCCGTCTAA

Library Parental gene expression (RPM)
SRP017611_brain 36 .37 RPM
SRP017611_kidney 29 .70 RPM
SRP017611_liver 15 .41 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000012873 ortholog_one2one 1 retrogene
retro_cfam_1356,
Callithrix jacchus ENSCJAG00000012411 ortholog_one2one 1 retrogene
retro_cjac_2838,
Dasypus novemcinctus ENSDNOG00000002939 ortholog_one2one 1 retrogene
retro_dnov_530,
Macaca mulatta ENSMMUG00000008541 ortholog_one2one 1 retrogene
retro_mmul_472,
Otolemur garnettii ENSOGAG00000010901 ortholog_one2one 1 retrogene
retro_ogar_1184,
Ictidomys tridecemlineatus ENSSTOG00000011828 ortholog_one2one 4 retrogenes
retro_itri_1004, retro_itri_1130, retro_itri_1513, retro_itri_559,
Tupaia belangeri ENSTBEG00000002570 ortholog_one2one 4 retrogenes
retro_tbel_1259, retro_tbel_1260, retro_tbel_2963, retro_tbel_3044,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_843 94.62 82.80
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Download FASTA sequences of all ENSOCUG00000008761 retrocopies