Parental gene: | ENO3, ENSCAFG00000015802 |
| Aliases: | None |
| Description: | enolase 3 (beta, muscle) [Source:HGNC Symbol;Acc:3354] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 5:31662114..31666140(-) |
>ENSCAFG00000015802
ATGGCCATGCAGAAAATCTTCGCCCGGGAGATCCTGGACTCCAGGGGCAACCCCACGGTAGAAGTGGACCTGCACACGGC
CAAGGGCCGATTTCGAGCAGCTGTGCCCAGCGGAGCCTCCACTGGTATCTACGAAGCCCTGGAACTGAGAGATGGAGACA
AGTCCCGCTACCTAGGGAAAGGTGTCCTCAAGGCTGTGGAACACATCAACAAGACCCTAGGCCCTGCTCTGCTGGAAAAG
AAACTCAGCGTGGTGGATCAAGAGAAAGTTGACAAATTCATGATTGAGCTGGATGGGACAGAGAATAAGTCCAAGTTCGG
GGCAAATGCCATCTTGGGTGTGTCCCTGGCTGTGTGCAAGGCTGGAGCGGCAGAGAAAGGGGTCCCACTCTACCGGCACA
TCGCGGACCTCGCCGGGAACCCTGACTTAGTCCTGCCCGTCCCTGCCTTCAATGTCATCAATGGGGGCTCCCACGCCGGG
AACAAGCTGGCCATGCAGGAGTTCATGATCTTGCCCGTGGGAGCCAGCTCCTTCAGGGAAGCCATGCGTATCGGCGCTGA
GGTCTACCACCACCTCAAGGGTGTCATCAAGGCCAAGTATGGGAAGGATGCCACCAACGTGGGGGACGAAGGCGGCTTCG
CACCCAACATCCTGGAGAACAATGAGGCCCTGGAGCTGCTGAAGACGGCCATCCAGGCCGCCGGCTACCCAGACAAGGTG
GTGATTGGCATGGACGTGGCAGCATCTGAGTTCTATCGCAACGGGAAGTACGACCTGGACTTCAAGTCACCTGATGACCC
TGCTCGGCACATCACTGGGGAGAAGCTGGGCGAGCTGTATAAGAGCTTCATCAAGAACTACCCTGTGGTCTCCATCGAGG
ACCCATTTGACCAGGACGACTGGGCCACCTGGACCTCATTCCTCTCGGGGGTTAACATCCAGATTGTGGGGGACGACCTC
ACAGTCACCAACCCCAAGAGGATTGCCCAGGCCGTGGAGAAGAAGGCCTGCAACTGCCTGCTGCTGAAGGTCAACCAGAT
CGGCTCCGTGACTGAGTCCATCCAGGCCTGCAAACTGGCTCAGTCTAACGGCTGGGGGGTGATGGTGAGCCACCGCTCCG
GGGAGACGGAGGACACATTTATCGCCGACCTCGTCGTGGGGCTCTGCACAGGGCAGATCAAGACTGGTGCTCCCTGCCGC
TCGGAGCGGCTGGCCAAGTACAACCAGCTCATGAGGATTGAAGAGGCTCTCGGGGACAAGGCTGTCTTTGCCGGACGCAA
GTTCCGTAACCCGAAGGCCAAGTGA
ATGGCCATGCAGAAAATCTTCGCCCGGGAGATCCTGGACTCCAGGGGCAACCCCACGGTAGAAGTGGACCTGCACACGGC
CAAGGGCCGATTTCGAGCAGCTGTGCCCAGCGGAGCCTCCACTGGTATCTACGAAGCCCTGGAACTGAGAGATGGAGACA
AGTCCCGCTACCTAGGGAAAGGTGTCCTCAAGGCTGTGGAACACATCAACAAGACCCTAGGCCCTGCTCTGCTGGAAAAG
AAACTCAGCGTGGTGGATCAAGAGAAAGTTGACAAATTCATGATTGAGCTGGATGGGACAGAGAATAAGTCCAAGTTCGG
GGCAAATGCCATCTTGGGTGTGTCCCTGGCTGTGTGCAAGGCTGGAGCGGCAGAGAAAGGGGTCCCACTCTACCGGCACA
TCGCGGACCTCGCCGGGAACCCTGACTTAGTCCTGCCCGTCCCTGCCTTCAATGTCATCAATGGGGGCTCCCACGCCGGG
AACAAGCTGGCCATGCAGGAGTTCATGATCTTGCCCGTGGGAGCCAGCTCCTTCAGGGAAGCCATGCGTATCGGCGCTGA
GGTCTACCACCACCTCAAGGGTGTCATCAAGGCCAAGTATGGGAAGGATGCCACCAACGTGGGGGACGAAGGCGGCTTCG
CACCCAACATCCTGGAGAACAATGAGGCCCTGGAGCTGCTGAAGACGGCCATCCAGGCCGCCGGCTACCCAGACAAGGTG
GTGATTGGCATGGACGTGGCAGCATCTGAGTTCTATCGCAACGGGAAGTACGACCTGGACTTCAAGTCACCTGATGACCC
TGCTCGGCACATCACTGGGGAGAAGCTGGGCGAGCTGTATAAGAGCTTCATCAAGAACTACCCTGTGGTCTCCATCGAGG
ACCCATTTGACCAGGACGACTGGGCCACCTGGACCTCATTCCTCTCGGGGGTTAACATCCAGATTGTGGGGGACGACCTC
ACAGTCACCAACCCCAAGAGGATTGCCCAGGCCGTGGAGAAGAAGGCCTGCAACTGCCTGCTGCTGAAGGTCAACCAGAT
CGGCTCCGTGACTGAGTCCATCCAGGCCTGCAAACTGGCTCAGTCTAACGGCTGGGGGGTGATGGTGAGCCACCGCTCCG
GGGAGACGGAGGACACATTTATCGCCGACCTCGTCGTGGGGCTCTGCACAGGGCAGATCAAGACTGGTGCTCCCTGCCGC
TCGGAGCGGCTGGCCAAGTACAACCAGCTCATGAGGATTGAAGAGGCTCTCGGGGACAAGGCTGTCTTTGCCGGACGCAA
GTTCCGTAACCCGAAGGCCAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 6 .51 RPM |
| SRP017611_kidney | 3 .30 RPM |
| SRP017611_liver | 20 .38 RPM |
| SRP012049_cerebellum | 15 .88 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000014523 | within_species_paralog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000011679 | possible_ortholog | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000007915 | ortholog_one2one | 25 retrogenes |
retro_meug_1019, retro_meug_1341, retro_meug_1483, retro_meug_1540, retro_meug_1566, retro_meug_1605, retro_meug_170, retro_meug_1701, retro_meug_1743, retro_meug_1869, retro_meug_1905, retro_meug_1929, retro_meug_2026, retro_meug_2190, retro_meug_235, retro_meug_269, retro_meug_578, retro_meug_607, retro_meug_637, retro_meug_803, retro_meug_820, retro_meug_906, retro_meug_965, retro_meug_973, retro_meug_976,
|
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1010 | 75.34 | 83.64 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_2134 | 81.01 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000015802 retrocopies