Parental gene:

SERBP1, ENSCAFG00000018538

Aliases:None
Description:SERPINE1 mRNA binding protein 1 [Source:HGNC Symbol;Acc:17860]
Organism:Dog (Canis familiaris)
Coordinates:5:43169993..43189586(+)


>ENSCAFG00000018538
ATGCCTGGGCACTTACAGGAAGGCTTCGGCTGCGTGGTCACCAACCGATTCGACCAGTTATTTGACGACGAATCGGACCC
CTTTGAGGTGTTGAAGGCAGCAGAGAACAAGAAAAAAGAAGCCGGCGGGGGCGGCGTTGGGGGCCCTGGGGCCAAGAGCG
CAGCTCAGGCCGCAGCCCAGACCAACTCCAGCGCGGCAGGCAAACAGCTGCGTAAAGAGTCCCAGAAAGACCGCAAGAAC
CCGCTGCCCCCCAGCGTTGGCGTGGTTGACAAGAAAGAGGAGACGCAGCCGCCCGTGGCGCTTAAGAAAGAAGGAATAAG
ACGTGTTGGAAGAAGACCTGATCAACAGCTGCAGAGTGAAGGGAAAATAATTGATAGGAGACCAGAAAGGCGACCACCTC
GTGAACGACGATTTGAAAAGCCACTTGAAGAAAAGGGTGAAGGAGGAGAATTTTCAGTTGATAGACCGATTATTGACCGG
CCTATTCGAGGCCGTGGTGGTCTTGGAAGAGGTCGAGGAGGCCGCGGACGTGGAATGGGCCGAGGAGATGGATTTGATTC
TCGTGGCAAACGTGAATTTGATAGGCATAGTGGAAGTGATAGATCTTCTTTTTCACATTACAGTGGCCTGAAGCATGAGG
ACAAACGTGGAGGTAGCGGATCTCACAACTGGGGAACTGTCAAAGACGAATTAACAGAGTCCCCAAAATACATTCAGAAA
CAAATATCTTATAATTGCAGTGACTTGGATCAATCAAATGTGACTGAGGAAACACCTGAAGGTGAAGAACATCCAGTTGC
AGACACTGAAAATAAGGAGAACGAAGTTGAAGAAGTAAAGGAAGAGGGTCCAAAAGAAATGACTTTGGATGAGTGGAAAG
CTATTCAAAATAAGGATCGGGCAAAAGTAGAATTTAATATCCGAAAACCAAATGAAGGTGCTGATGGGCAGTGGAAGAAG
GGATTTGTTCTTCATAAATCAAAGAGTGAAGAGGCTCATGCTGAAGATTCGGTTATGGACCATCATTTCCGGAAGCCAGC
AAATGATATAACGTCTCAGCTGGAGATCAATTTTGGAGACCTTGGCCGCCCAGGACGTGGTGGCAGGGGAGGACGAGGTG
GCCGTGGGCGTGGTGGACGTCCAAACCGTGGCAGCAGAACTGACAAGTCAAGTGCTTCTGCTCCTGATGTAGATGACCCT
GAGGCATTCCCAGCTCTGGCTTAA

Library Parental gene expression (RPM)
SRP017611_brain 122 .03 RPM
SRP017611_kidney 195 .54 RPM
SRP017611_liver 104 .93 RPM
SRP012049_cerebellum 220 .91 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000017440 ortholog_one2one 2 retrogenes
retro_cjac_1207, retro_cjac_3015,
Homo sapiens ENSG00000142864 ortholog_one2one 3 retrogenes
retro_hsap_3056, retro_hsap_413, retro_hsap_4695,
Gorilla gorilla ENSGGOG00000010396 ortholog_one2one 1 retrogene
retro_ggor_408,
Myotis lucifugus ENSMLUG00000001424 ortholog_one2one 1 retrogene
retro_mluc_691,
Otolemur garnettii ENSOGAG00000025884 ortholog_one2one 1 retrogene
retro_ogar_185,
Pan troglodytes ENSPTRG00000023560 ortholog_one2one 2 retrogenes
retro_ptro_1985, retro_ptro_317,
Tupaia belangeri ENSTBEG00000003689 ortholog_one2one 4 retrogenes
retro_tbel_1004, retro_tbel_1331, retro_tbel_2427, retro_tbel_532,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_546 92.72 50.61
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Download FASTA sequences of all ENSCAFG00000018538 retrocopies