RetrogeneDB ID: | retro_mluc_691 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429771:7321059..7321997(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SERBP1 | ||
Ensembl ID: | ENSMLUG00000001424 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 69.09 % |
Parental protein coverage: | 74.7 % |
Number of stop codons detected: | 5 |
Number of frameshifts detected | 1 |
Parental | KSAAQA-AAQTNSNAAGKQLRKESQKERKNPLPSNAGVAD-KKEETQPPVAL-KKEVRGEMASYPGNFQI |
.S.AQA..AQTNSNAAGK.L.KESQKERKNPLPSN..VAD.K.E...P...L.KKE..........NF.. | |
Retrocopy | RSTAQA<TAQTNSNAAGK*LCKESQKERKNPLPSNIAVADKKEETQPPLWCLRKKE*HVLEENGINNFRV |
Parental | GVSL--KRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGR----GRGGRGRGMGRGD-G |
.......RP.RRPPRER.FEK.LEEKGEGGEF.VDRPI..RPIRG.GGLGR....G..G.GRG.G....G | |
Retrocopy | KGKIIDRRPQRRPPRER*FEKSLEEKGEGGEF*VDRPIVHRPIRGCGGLGRG*GPGERGMGRGDGFDSRG |
Parental | FDSRGKREFDRHSGSDRSGLKHEDKRGGSGSHNWGTVKDELTDLEQPNVTEETPEGEEHPVADTESGKMW |
............S.S..SGLKHE.K.GGSGSHNWGTVKDELTDLEQPNVTEE.PE.EEHPVA.TE..... | |
Retrocopy | KREFNRHSVSDRSFSHYSGLKHEVKHGGSGSHNWGTVKDELTDLEQPNVTEEIPEVEEHPVANTENK--- |
Parental | ENEVEEVKEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGADGQWKKGFVLHKSKSEEAHAEDSVMDHH |
EN.VEEVKEEGPKEMTLDEWKAIQNKD.AKVEFNIRKPNEG..GQWKKGFVLHKSK..EA.AEDSVMDHH | |
Retrocopy | ENKVEEVKEEGPKEMTLDEWKAIQNKDQAKVEFNIRKPNEGTNGQWKKGFVLHKSKGKEAYAEDSVMDHH |
Parental | FRKPANDITSQLEINFGDLGRPGRGGRGGRGGRGRGG |
FRKP.N.I.SQLEINF.DLG.PG..G.GG.GGRG..G | |
Retrocopy | FRKPENHIMSQLEINFRDLGCPGHDGKGGQGGRGCAG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000018538 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000017440 | 2 retrocopies | |
Homo sapiens | ENSG00000142864 | 3 retrocopies | |
Gorilla gorilla | ENSGGOG00000010396 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000001424 | 1 retrocopy |
retro_mluc_691 ,
|
Oryctolagus cuniculus | ENSOCUG00000008946 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000025884 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000001256 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000023560 | 2 retrocopies | |
Sorex araneus | ENSSARG00000000803 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000003689 | 4 retrocopies |