Parental gene: | SERBP1, ENSG00000142864 |
| Aliases: | SERBP1, CHD3IP, HABP4L, PAI-RBP1, PAIRBP1 |
| Description: | SERPINE1 mRNA binding protein 1 [Source:HGNC Symbol;Acc:17860] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 1:67873492..67896098(-) |
>ENSG00000142864
ATGCCTGGGCACTTACAGGAAGGCTTCGGCTGCGTGGTCACCAACCGATTCGACCAGTTATTTGACGACGAATCGGACCC
CTTCGAGGTGCTGAAGGCAGCAGAGAACAAGAAAAAAGAAGCCGGCGGGGGCGGCGTTGGGGGCCCTGGGGCCAAGAGCG
CAGCTCAGGCCGCGGCCCAGACCAACTCCAACGCGGCAGGCAAACAGCTGCGCAAGGAGTCCCAGAAAGACCGCAAGAAC
CCGCTGCCCCCCAGCGTTGGCGTGGTTGACAAGAAAGAGGAGACGCAGCCGCCCGTGGCGCTTAAGAAAGAAGGAATAAG
ACGAGTTGGAAGAAGACCTGATCAACAACTTCAGGGTGAAGGGAAAATAATTGATAGAAGACCAGAAAGGCGACCACCTC
GTGAACGAAGATTCGAAAAGCCACTTGAAGAAAAGGGTGAAGGAGGCGAATTTTCAGTTGATAGACCGATTATTGACCGA
CCTATTCGAGGTCGTGGTGGTCTTGGAAGAGGTCGAGGGGGCCGTGGACGTGGAATGGGCCGAGGAGATGGATTTGATTC
TCGTGGCAAACGTGAATTTGATAGGCATAGTGGAAGTGATAGATCTTCTTTTTCACATTACAGTGGCCTGAAGCACGAGG
ACAAACGTGGAGGTAGCGGATCTCACAACTGGGGAACTGTCAAAGACGAATTAACAGAGTCCCCCAAATACATTCAGAAA
CAAATATCTTATAATTACAGTGACTTGGATCAATCAAATGTGACTGAGGAAACACCTGAAGGTGAAGAACATCATCCAGT
GGCAGACACTGAAAATAAGGAGAATGAAGTTGAAGAGGTAAAAGAGGAGGGTCCAAAAGAGATGACTTTGGATGAGTGGA
AGGCTATTCAAAATAAGGACCGGGCAAAAGTAGAATTTAATATCCGAAAACCAAATGAAGGTGCTGATGGGCAGTGGAAG
AAGGGATTTGTTCTTCATAAATCAAAGAGTGAAGAGGCTCATGCTGAAGATTCGGTTATGGACCATCATTTCCGGAAGCC
AGCAAATGATATAACGTCTCAGCTGGAGATCAATTTTGGAGACCTTGGCCGCCCAGGACGTGGCGGCAGGGGAGGACGAG
GTGGACGTGGGCGTGGTGGGCGCCCAAACCGTGGCAGCAGGACCGACAAGTCAAGTGCTTCTGCTCCTGATGTGGATGAC
CCAGAGGCATTCCCAGCTCTGGCTTAA
ATGCCTGGGCACTTACAGGAAGGCTTCGGCTGCGTGGTCACCAACCGATTCGACCAGTTATTTGACGACGAATCGGACCC
CTTCGAGGTGCTGAAGGCAGCAGAGAACAAGAAAAAAGAAGCCGGCGGGGGCGGCGTTGGGGGCCCTGGGGCCAAGAGCG
CAGCTCAGGCCGCGGCCCAGACCAACTCCAACGCGGCAGGCAAACAGCTGCGCAAGGAGTCCCAGAAAGACCGCAAGAAC
CCGCTGCCCCCCAGCGTTGGCGTGGTTGACAAGAAAGAGGAGACGCAGCCGCCCGTGGCGCTTAAGAAAGAAGGAATAAG
ACGAGTTGGAAGAAGACCTGATCAACAACTTCAGGGTGAAGGGAAAATAATTGATAGAAGACCAGAAAGGCGACCACCTC
GTGAACGAAGATTCGAAAAGCCACTTGAAGAAAAGGGTGAAGGAGGCGAATTTTCAGTTGATAGACCGATTATTGACCGA
CCTATTCGAGGTCGTGGTGGTCTTGGAAGAGGTCGAGGGGGCCGTGGACGTGGAATGGGCCGAGGAGATGGATTTGATTC
TCGTGGCAAACGTGAATTTGATAGGCATAGTGGAAGTGATAGATCTTCTTTTTCACATTACAGTGGCCTGAAGCACGAGG
ACAAACGTGGAGGTAGCGGATCTCACAACTGGGGAACTGTCAAAGACGAATTAACAGAGTCCCCCAAATACATTCAGAAA
CAAATATCTTATAATTACAGTGACTTGGATCAATCAAATGTGACTGAGGAAACACCTGAAGGTGAAGAACATCATCCAGT
GGCAGACACTGAAAATAAGGAGAATGAAGTTGAAGAGGTAAAAGAGGAGGGTCCAAAAGAGATGACTTTGGATGAGTGGA
AGGCTATTCAAAATAAGGACCGGGCAAAAGTAGAATTTAATATCCGAAAACCAAATGAAGGTGCTGATGGGCAGTGGAAG
AAGGGATTTGTTCTTCATAAATCAAAGAGTGAAGAGGCTCATGCTGAAGATTCGGTTATGGACCATCATTTCCGGAAGCC
AGCAAATGATATAACGTCTCAGCTGGAGATCAATTTTGGAGACCTTGGCCGCCCAGGACGTGGCGGCAGGGGAGGACGAG
GTGGACGTGGGCGTGGTGGGCGCCCAAACCGTGGCAGCAGGACCGACAAGTCAAGTGCTTCTGCTCCTGATGTGGATGAC
CCAGAGGCATTCCCAGCTCTGGCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 169 .01 RPM |
| bodymap2_lung | 255 .54 RPM |
| bodymap2_breast | 247 .26 RPM |
| bodymap2_adipose | 280 .28 RPM |
| bodymap2_adrenal | 259 .94 RPM |
| bodymap2_skeletal_muscle | 342 .10 RPM |
| bodymap2_thyroid | 388 .79 RPM |
| bodymap2_prostate | 279 .30 RPM |
| bodymap2_colon | 385 .44 RPM |
| bodymap2_testis | 334 .21 RPM |
| bodymap2_brain | 141 .41 RPM |
| bodymap2_heart | 165 .85 RPM |
| bodymap2_white_blood_cells | 312 .07 RPM |
| bodymap2_lymph_node | 246 .53 RPM |
| bodymap2_ovary | 322 .71 RPM |
| bodymap2_kidney | 267 .30 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000018538 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000017440 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000010396 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000001424 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000025884 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000023560 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000003689 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_413 | 72.98 | 63.57 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_3056 | 95.94 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_4695 | 92.98 | 73.64 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000142864 retrocopies