Parental gene: | DRG1, ENSCAFG00000032601 |
| Aliases: | None |
| Description: | developmentally regulated GTP binding protein 1 [Source:HGNC Symbol;Acc:3029] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 26:24327840..24350437(+) |
>ENSCAFG00000032601
ATGAGCAGCACCTTAGCGAAGATCGCGGAGATCGAAGCCGAGATGGCTCGGACTCAAAAGAACAAGGCCACAGCACACCA
CCTAGGGCTGCTTAAGGCTCGCCTTGCTAAGCTTCGTAGAGAACTCATTACCCCAAAAGGTGGTGGTGGTGGTGGGCCAG
GAGAAGGTTTTGATGTGGCCAAGACAGGTGATGCTCGAATTGGGTTTGTGGGTTTTCCATCAGTGGGGAAGTCAACACTG
CTTAGTAACCTGGCAGGGGTATATTCTGAGGTGGCAGCCTATGAGTTCACTACTCTGACCACTGTGCCCGGTGTCATCAG
ATACAAAGGTGCCAAGATCCAGCTCCTGGATCTTCCAGGTATCATTGAGGGTGCCAAGGATGGGAAAGGTAGAGGCCGTC
AAGTCATTGCAGTGGCCCGAACATGTAACTTGATCCTTATTGTTCTGGATGTCCTGAAACCCTTGGGACATAAAAAGATA
ATTGAAAATGAGCTGGAAGGCTTTGGCATTCGTTTGAACAGCAAACCCCCCAACATTGGCTTTAAGAAGAAGGATAAAGG
AGGCATTAATCTCACGGCCACTTGCCCTCAGAGTGAGCTGGATGCTGAGACTGTGAAGAGCATTCTGGCTGAATACAAAA
TTCACAATGCTGATGTGACGCTGCGTAGTGATGCCACAGCAGACGACCTCATCGATGTGGTGGAAGGAAACAGAGTTTAT
ATCCCTTGTATCTATGTGTTGAATAAGATTGATCAGATCTCCATTGAGGAATTGGATATCATCTATAAGGTGCCTCACTG
TGTACCCATTTCTGCCCATCACCGCTGGAATTTTGATGACCTATTGGAAAAGATCTGGGACTATCTGAAACTAGTGAGGA
TTTACACCAAACCCAAAGGCCAGTTGCCTGATTATACATCTCCAGTGGTGCTGCCTTATTCCAGGACTACAGTGGAGGAT
TTCTGCATGAAGATTCATAAAAATCTTATCAAAGAATTTAAATACGCTTTGGTTTGGGGTCTGTCTGTGAAACATAATCC
TCAAAAAGTGGGTAAAGACCATACGTTGGAGGACGAGGATGTCATTCAGATTGTGAAGAAG
ATGAGCAGCACCTTAGCGAAGATCGCGGAGATCGAAGCCGAGATGGCTCGGACTCAAAAGAACAAGGCCACAGCACACCA
CCTAGGGCTGCTTAAGGCTCGCCTTGCTAAGCTTCGTAGAGAACTCATTACCCCAAAAGGTGGTGGTGGTGGTGGGCCAG
GAGAAGGTTTTGATGTGGCCAAGACAGGTGATGCTCGAATTGGGTTTGTGGGTTTTCCATCAGTGGGGAAGTCAACACTG
CTTAGTAACCTGGCAGGGGTATATTCTGAGGTGGCAGCCTATGAGTTCACTACTCTGACCACTGTGCCCGGTGTCATCAG
ATACAAAGGTGCCAAGATCCAGCTCCTGGATCTTCCAGGTATCATTGAGGGTGCCAAGGATGGGAAAGGTAGAGGCCGTC
AAGTCATTGCAGTGGCCCGAACATGTAACTTGATCCTTATTGTTCTGGATGTCCTGAAACCCTTGGGACATAAAAAGATA
ATTGAAAATGAGCTGGAAGGCTTTGGCATTCGTTTGAACAGCAAACCCCCCAACATTGGCTTTAAGAAGAAGGATAAAGG
AGGCATTAATCTCACGGCCACTTGCCCTCAGAGTGAGCTGGATGCTGAGACTGTGAAGAGCATTCTGGCTGAATACAAAA
TTCACAATGCTGATGTGACGCTGCGTAGTGATGCCACAGCAGACGACCTCATCGATGTGGTGGAAGGAAACAGAGTTTAT
ATCCCTTGTATCTATGTGTTGAATAAGATTGATCAGATCTCCATTGAGGAATTGGATATCATCTATAAGGTGCCTCACTG
TGTACCCATTTCTGCCCATCACCGCTGGAATTTTGATGACCTATTGGAAAAGATCTGGGACTATCTGAAACTAGTGAGGA
TTTACACCAAACCCAAAGGCCAGTTGCCTGATTATACATCTCCAGTGGTGCTGCCTTATTCCAGGACTACAGTGGAGGAT
TTCTGCATGAAGATTCATAAAAATCTTATCAAAGAATTTAAATACGCTTTGGTTTGGGGTCTGTCTGTGAAACATAATCC
TCAAAAAGTGGGTAAAGACCATACGTTGGAGGACGAGGATGTCATTCAGATTGTGAAGAAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 34 .77 RPM |
| SRP017611_kidney | 52 .04 RPM |
| SRP017611_liver | 21 .97 RPM |
| SRP012049_cerebellum | 36 .79 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000007040 | ortholog_one2one | 1 retrogene | |
| Ciona intestinalis | ENSCING00000003305 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000011009 | ortholog_one2many | 4 retrogenes | |
| Cavia porcellus | ENSCPOG00000010791 | ortholog_one2one | 1 retrogene | |
| Ciona savignyi | ENSCSAVG00000006503 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000001312 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000185721 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000011185 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000007033 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000019099 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000012810 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000020457 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000027001 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000014272 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000014187 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000010160 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_382 | 96.06 | 69.21 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_415 | 82.93 | 55.31 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cfam_453 | 80.66 | 65.94 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cfam_607 | 86.12 | 56.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cfam_1535 | 87.23 | 50.95 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_cfam_1807 | 76.61 | 79.84 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000032601 retrocopies