Parental gene: | SMARCE1, ENSCHOG00000008727 |
| Aliases: | None |
| Description: | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:HGNC Symbol;Acc:11109] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_701:2131..20915(-) |
>ENSCHOG00000008727
ATGTCAAAAAGACCATCTTATGCCCCACCTCCCACCCCAGCTCCTGCAACACAAATGCCCAGCACACCAGGGTTTGTGGG
ATACAATCCATACAGTCATCTCGCCTACAACAACTACAGGCTGGGAGGGAACCCGGGCACCAACAGCCGGGTCACGGCAT
CCTCTGGTATTACGATTCCAAAACCCCCAAAGCCACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGGTC
TGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGAAATTGGCAAGATTATTGGTGGCATGTGGCGAGATCT
CACTGATGAAGAGAAACAAGAATATTTAAATGAATACGAAGCAGAAAAGATAGAGTACAATGAATCTATGAAGGCCTATC
ATAATTCCCCCGCATACCTTGCTTATATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGGAAGAAAGTCGACAGAGA
CAGTCTCGCATGGAGAAAGGAGAACCTTACATGAGCATTCAGCCTGCTGAAGATCCAGATGATTACGATGATGGCTTTTC
AATGAAGCATACAGCCACGGCCCGTTTCCAGAGAAACCACCGCCTCATCAGTGAAATCCTTAGTGAGAGTGTGGTGCCAG
ACCGTCGGTCAGTCACAACAGCTAGGATGCAGCTCAAACGACAGGTCCAGTCCTTGATGCATCAGCGAAAACTAGAAGCT
GAACTTCTTCAAATAGAGGAGAGACACCAAGAAAAGAAGAGGAAATTCCTGGAAAGCACAGATTCATTTAACAATGAACT
TAAAAGGTTGTGCGGTTTGAAGGTAGAAGTGGATATGGAGAAAATTGCAGCTGAAATTGCACAGGCAGAGGAACAGGCCC
GCAAAAGGCAGGAGGAACGGGAGAAAGAGGCAGCAGAACAAGCTGAACACAGCCAGAGCAGTATTGTTCCTGAGGAAGAA
CAAGTGGCTAATAAAATCGAAGAAAAGAAGGAAGATGAGAGCATTCCAATGGAGACAGAGGAGGCACATCTTGAAGAAAC
AACGGAAGGCCAACAGAATGGTGAAGAAGGCACATCTACTGAGGACAAGGAGAGTGGGCAGGAGGGGGTCGACAGTATGG
CAGAGGAAGGAACCAGTGATAGCAACACTGGCTCAGACAGCAACAGTGCAACAGTGGAGGAGACACCAACAGATCCCATA
CCAGAAGAGGAGAAAAAAGAATAA
ATGTCAAAAAGACCATCTTATGCCCCACCTCCCACCCCAGCTCCTGCAACACAAATGCCCAGCACACCAGGGTTTGTGGG
ATACAATCCATACAGTCATCTCGCCTACAACAACTACAGGCTGGGAGGGAACCCGGGCACCAACAGCCGGGTCACGGCAT
CCTCTGGTATTACGATTCCAAAACCCCCAAAGCCACCAGATAAGCCGCTGATGCCCTACATGAGGTACAGCAGAAAGGTC
TGGGACCAAGTAAAGGCTTCCAACCCTGACCTAAAGTTGTGGGAAATTGGCAAGATTATTGGTGGCATGTGGCGAGATCT
CACTGATGAAGAGAAACAAGAATATTTAAATGAATACGAAGCAGAAAAGATAGAGTACAATGAATCTATGAAGGCCTATC
ATAATTCCCCCGCATACCTTGCTTATATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGGAAGAAAGTCGACAGAGA
CAGTCTCGCATGGAGAAAGGAGAACCTTACATGAGCATTCAGCCTGCTGAAGATCCAGATGATTACGATGATGGCTTTTC
AATGAAGCATACAGCCACGGCCCGTTTCCAGAGAAACCACCGCCTCATCAGTGAAATCCTTAGTGAGAGTGTGGTGCCAG
ACCGTCGGTCAGTCACAACAGCTAGGATGCAGCTCAAACGACAGGTCCAGTCCTTGATGCATCAGCGAAAACTAGAAGCT
GAACTTCTTCAAATAGAGGAGAGACACCAAGAAAAGAAGAGGAAATTCCTGGAAAGCACAGATTCATTTAACAATGAACT
TAAAAGGTTGTGCGGTTTGAAGGTAGAAGTGGATATGGAGAAAATTGCAGCTGAAATTGCACAGGCAGAGGAACAGGCCC
GCAAAAGGCAGGAGGAACGGGAGAAAGAGGCAGCAGAACAAGCTGAACACAGCCAGAGCAGTATTGTTCCTGAGGAAGAA
CAAGTGGCTAATAAAATCGAAGAAAAGAAGGAAGATGAGAGCATTCCAATGGAGACAGAGGAGGCACATCTTGAAGAAAC
AACGGAAGGCCAACAGAATGGTGAAGAAGGCACATCTACTGAGGACAAGGAGAGTGGGCAGGAGGGGGTCGACAGTATGG
CAGAGGAAGGAACCAGTGATAGCAACACTGGCTCAGACAGCAACAGTGCAACAGTGGAGGAGACACCAACAGATCCCATA
CCAGAAGAGGAGAAAAAAGAATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000016025 | ortholog_one2one | 8 retrogenes | |
| Callithrix jacchus | ENSCJAG00000013573 | possible_ortholog | 4 retrogenes | |
| Felis catus | ENSFCAG00000009646 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000011803 | possible_ortholog | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000004005 | possible_ortholog | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000014660 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000008981 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000008456 | possible_ortholog | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000010676 | possible_ortholog | 7 retrogenes | |
| Tursiops truncatus | ENSTTRG00000013885 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_482 | 93.31 | 87.22 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_573 | 96.46 | 55.28 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_1245 | 75.09 | 69.53 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000008727 retrocopies