Parental gene: | CBX3, ENSCHOG00000013843 |
| Aliases: | None |
| Description: | chromobox homolog 3 [Source:HGNC Symbol;Acc:1553] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | scaffold_8000:13793..22550(+) |
>ENSCHOG00000013843
ATGGCCTCCAATAAAACTACATTGCAAAAAATGGGAAAGAAGCAGAATGGAAAGAGTAAAAAAGTTGAAGAGGCAGAGCC
TGAAGAATTTGTGGTGGAAAAAGTACTGGATCGACGTGTAGTGAATGGGAAGGTGGAGTATTTCCTGAAGTGGAAGGGAT
TTACAGATGCTGACAATACTTGGGAGCCTGAAGAAAATTTAGATTGCCCAGAGTTAATTGAAGCATTCCTTAATTCTCAA
AAAGCTGGTAAAGAGAAAGATGGTACCAAAAGAAAATCTTTATCTGACAGTGAGTCTGATGACAGCAAATCAAAGAAGAA
AAGAGATGCTGCTGACAAACCAAGAGGCTTTGCTAGAGGTCTTGATCCTGAACGCATAATTGGTGCCACGGACAGCAGTG
GAGAATTAATGTTTCTCATGAAATGGAAAGATTCAGATGAGGCAGACTTGGTGCTGGCAAAAGAGGCAAACATGAAGTGT
CCTCAAATTGTAATTGCTTTTTATGAAGAGAGACTAACTTGGCATTCTTGTCCAGAAGATGAAGCTCAATAA
ATGGCCTCCAATAAAACTACATTGCAAAAAATGGGAAAGAAGCAGAATGGAAAGAGTAAAAAAGTTGAAGAGGCAGAGCC
TGAAGAATTTGTGGTGGAAAAAGTACTGGATCGACGTGTAGTGAATGGGAAGGTGGAGTATTTCCTGAAGTGGAAGGGAT
TTACAGATGCTGACAATACTTGGGAGCCTGAAGAAAATTTAGATTGCCCAGAGTTAATTGAAGCATTCCTTAATTCTCAA
AAAGCTGGTAAAGAGAAAGATGGTACCAAAAGAAAATCTTTATCTGACAGTGAGTCTGATGACAGCAAATCAAAGAAGAA
AAGAGATGCTGCTGACAAACCAAGAGGCTTTGCTAGAGGTCTTGATCCTGAACGCATAATTGGTGCCACGGACAGCAGTG
GAGAATTAATGTTTCTCATGAAATGGAAAGATTCAGATGAGGCAGACTTGGTGCTGGCAAAAGAGGCAAACATGAAGTGT
CCTCAAATTGTAATTGCTTTTTATGAAGAGAGACTAACTTGGCATTCTTGTCCAGAAGATGAAGCTCAATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000011957 | within_species_paralog | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000015168 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000015224 | possible_ortholog | 6 retrogenes | |
| Homo sapiens | ENSG00000122565 | ortholog_one2one | 9 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000014931 | ortholog_one2one | 9 retrogenes | |
| Ochotona princeps | ENSOPRG00000011713 | ortholog_one2one | 9 retrogenes | |
| Sorex araneus | ENSSARG00000008011 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000017913 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000016711 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_87 | 93.53 | 75.41 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_132 | 97.81 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_222 | 93.33 | 73.22 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_411 | 94.67 | 81.97 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_chof_676 | 83.64 | 88.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_chof_936 | 87.10 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_chof_1128 | 88.59 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_chof_1147 | 93.83 | 88.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_chof_1156 | 90.62 | 85.79 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_chof_1178 | 83.64 | 87.98 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_chof_1210 | 94.83 | 63.39 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_chof_1223 | 84.62 | 90.71 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_chof_1569 | 90.71 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_chof_1672 | 90.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_chof_1779 | 98.18 | 90.16 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_chof_1863 | 86.54 | 56.28 | Please wait, loading | Please wait, loading | Please wait, loading |
| 17. | retro_chof_1962 | 90.76 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 18. | retro_chof_2269 | 75.27 | 96.17 | Please wait, loading | Please wait, loading | Please wait, loading |
| 19. | retro_chof_2347 | 99.45 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 20. | retro_chof_2379 | 77.06 | 59.02 | Please wait, loading | Please wait, loading | Please wait, loading |
| 21. | retro_chof_2435 | 85.87 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 22. | retro_chof_2695 | 83.23 | 90.71 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000013843 retrocopies