Parental gene:

SHFM1, ENSCPOG00000010402

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_11:27950335..27968783(-)


>ENSCPOG00000010402
ATGTCAGAAAAAAAACAACCGGTAGATTTGGGTCTCCTAGAGGAGGACGACGAGTTCGAGGAGTTCCCTGCCGAAGACTG
GGCTGGTTTGGATGAAGACGAAGATGCCCATGTCTGGGAAGATAACTGGGATGATGACAATGTAGAGGACGACTTCTCCA
ATCAGTTACGAGCTGAACTAGAGAAACATGGTTATAAGATGGAGACTTCA

Library Parental gene expression (RPM)
SRP017611_brain 33 .19 RPM
SRP017611_kidney 53 .60 RPM
SRP017611_liver 70 .91 RPM
SRP040447_lung 41 .56 RPM
SRP040447_skeletal_muscle 71 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000002179 ortholog_one2one 1 retrogene
retro_cfam_1174,
Echinops telfairi ENSETEG00000019778 ortholog_one2one 1 retrogene
retro_etel_961,
Felis catus ENSFCAG00000023254 possible_ortholog 2 retrogenes
retro_fcat_1138, retro_fcat_121,
Myotis lucifugus ENSMLUG00000014208 ortholog_one2one 1 retrogene
retro_mluc_948,
Oryctolagus cuniculus ENSOCUG00000026246 possible_ortholog 3 retrogenes
retro_ocun_1324, retro_ocun_452, retro_ocun_77,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_446 80.60 95.71
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Download FASTA sequences of all ENSCPOG00000010402 retrocopies