Parental gene: | YY1, ENSCPOG00000020809 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_114:4074207..4083831(+) |
>ENSCPOG00000020809
GCAGATGAAAAAAAAGATATTGACCATGAGACAGTGGTCGAAGAACAGATCATTGGAGAGAACTCACCTCCTGACTATTC
AGAGTACATGACCGGAAAGAAACTCCCTCCCGGAGGAATCCCGGGCATCGACCTCTCAGATCCTAAACAGCTGGCGGAAT
TTGCTAGAATGAAGCCAAGAAAAATTAAAGAAGATGATGCTCCAAGAACAATAGCTTGCCCTCATAAAGGCTGCACAAAG
ATGTTCAGGGATAACTCTGCCATGAGAAAACATCTGCACACCCACGGCCCCCGAGTTCACGTCTGTGCAGAGTGTGGCAA
AGCTTTCGTTGAGAGCTCAAAACTAAAGCGACACCAGCTGGTTCATACTGGAGAGAAGCCCTTTCAGTGCACGTTCGAAG
GCTGTGGGAAACGCTTTTCACTGGACTTCAATTTGCGCACGCACGTGCGAATCCATACCGGAGACAGGCCCTATGTGTGC
CCCTTCGATGGCTGTAATAAGAAGTTTGCTCAGTCAACTAACCTGAAATCTCACATCTTAACACACGCTAAGGCCAAAAA
CAACCAG
GCAGATGAAAAAAAAGATATTGACCATGAGACAGTGGTCGAAGAACAGATCATTGGAGAGAACTCACCTCCTGACTATTC
AGAGTACATGACCGGAAAGAAACTCCCTCCCGGAGGAATCCCGGGCATCGACCTCTCAGATCCTAAACAGCTGGCGGAAT
TTGCTAGAATGAAGCCAAGAAAAATTAAAGAAGATGATGCTCCAAGAACAATAGCTTGCCCTCATAAAGGCTGCACAAAG
ATGTTCAGGGATAACTCTGCCATGAGAAAACATCTGCACACCCACGGCCCCCGAGTTCACGTCTGTGCAGAGTGTGGCAA
AGCTTTCGTTGAGAGCTCAAAACTAAAGCGACACCAGCTGGTTCATACTGGAGAGAAGCCCTTTCAGTGCACGTTCGAAG
GCTGTGGGAAACGCTTTTCACTGGACTTCAATTTGCGCACGCACGTGCGAATCCATACCGGAGACAGGCCCTATGTGTGC
CCCTTCGATGGCTGTAATAAGAAGTTTGCTCAGTCAACTAACCTGAAATCTCACATCTTAACACACGCTAAGGCCAAAAA
CAACCAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 20 .76 RPM |
| SRP017611_kidney | 29 .21 RPM |
| SRP017611_brain | 23 .18 RPM |
| SRP040447_lung | 29 .74 RPM |
| SRP040447_skeletal_muscle | 15 .89 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000011146 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000020819 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000016853 | possible_ortholog | 2 retrogenes | |
| Equus caballus | ENSECAG00000005805 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000100811 | possible_ortholog | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000026332 | possible_ortholog | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000002931 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000021264 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000026938 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_1220 | 75.13 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cpor_1522 | 59.82 | 57.67 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000020809 retrocopies