Parental gene: | QRSL1, ENSCPOG00000021670 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_63:6459454..6486234(+) |
>ENSCPOG00000021670
ACAATAAACAGAATTTCAAAGAAAGTTTCTGTGGCACTGAAACAAGGCCAGATTACACCAACAGAGCTGTGTCGGAAATG
TCTCTCCGTTATCCAGAAGACCAAGTTTCTAAATGCTTACATTACTGTGTCATACGAGGTGGCCTTAAAGCAGGCTGAAG
AATCAGAAAAAAGATACAAGAAAGGTCAGTCACTCGGGGAATTAGACGGAATTCCTGTGGCGGTAAAAGACAACTTTAGC
ACAGCTGGCATCGAGACAACGTGTGCATCAAATATGCTGAAAGGTTATATACCACCTTTTAATGCTACAGTAGTTCAGAA
GTTGCTGGATCAGGGAGCTGTACTAATGGGAAAAACAAATTTAGATGAGTTTGCTATGGGGTCTGGAAGCACGGATGGTG
CATTTGGGCCAGTGAAGAACCCCTGGAGTTACTCAAAACAGTACCGAGAACAGAGGCGGCTGCGGTCCCCGGGTGAGCGC
AGGGGTGCGGATGAGGACTGGCTGATCGCAGGAGGAAGCTCGGGCGGGAGCGCGGCTGCGGTGGCGGCGGCCACCTGCTT
TGCGGCTTTAGGATCAGACACTGGAGGATCAACCCGAAATCCTGCCGCCCACTGTGGGCTGGTCGGTTTTAAGCCCAGCT
ATGGTTTAGTCTCCCGTTATGGTCTCATTCCCCTGGTGAATTCCATGGATGTGCCAGGAATCTTAACCAGATGTGTGGAC
GATGCAGCAGCTGTATTGGGTGTACTGGCTGGACATGACCCCAAAGATTCTACCACGGTGCAGGATCCAGTTAAACCATT
TGTGCTTCCTAGTTTGACAGATGTGAGCAAACTGTGCGTAGGAATTCCAAAGGAATATCTCGTACCTGAGTTATCCAGTG
AAGTACGATCTCTCTGGTCCAAAGCTGCTGGCCTCTTTGAGTCTGCGGGAGCCAAGGTGATTGACGTATCCCTGCCTCAC
ACCTCGTACTCAATCGTCTGCTACCATGTACTGTGCACATCAGAAGTGGCATCAAACATGGCAAGATTTGATGGGCTAGA
ATATGGTCATAGATGTGACATTAATGAGTCTACTGAAGCCATGTATGCTGCCACCAGGCGGGAAGGGTTCAATGATGTCG
TCAGAGGAAGAATTCTTTCAGGAAACTTTTTCTTATTAAAAGAAAACTATGAAAATTATTTCATCAAAGCCCAGAAAGTG
AGGCGCCTCATCGCAAATGATTTTGTGAATGTCTTTAACTCTGGAGTGGACGTTGTACTGACCCCCACCACCCTGAGTGA
GGCAGTACCATTCTTGGAATTTATCAAAGAAGACAACAGAACTCGGAGTGCCCAAGATGATATTTTCACCCAGGCGGCCA
ACATGGCAGGGGTGCCCGCTGTGAGCGTGCCAGCCGGTCTCTCACCCCAGGGACTGCCGATCGGCCTGCAGTTCATCGCA
CCTGCCTTTGGTGACCAGAAGCTTCTGACAGTTGCCAAATGGTTTGAGAAACAAATACAGTTTCCAGTTACTCAGCTTCA
AGAACTCACAGAGGATTGTCCATCAGGCTTTGAAAATGACAACTCAGCTTCCGTTTTTCTGAAACAGTGCTGA
ACAATAAACAGAATTTCAAAGAAAGTTTCTGTGGCACTGAAACAAGGCCAGATTACACCAACAGAGCTGTGTCGGAAATG
TCTCTCCGTTATCCAGAAGACCAAGTTTCTAAATGCTTACATTACTGTGTCATACGAGGTGGCCTTAAAGCAGGCTGAAG
AATCAGAAAAAAGATACAAGAAAGGTCAGTCACTCGGGGAATTAGACGGAATTCCTGTGGCGGTAAAAGACAACTTTAGC
ACAGCTGGCATCGAGACAACGTGTGCATCAAATATGCTGAAAGGTTATATACCACCTTTTAATGCTACAGTAGTTCAGAA
GTTGCTGGATCAGGGAGCTGTACTAATGGGAAAAACAAATTTAGATGAGTTTGCTATGGGGTCTGGAAGCACGGATGGTG
CATTTGGGCCAGTGAAGAACCCCTGGAGTTACTCAAAACAGTACCGAGAACAGAGGCGGCTGCGGTCCCCGGGTGAGCGC
AGGGGTGCGGATGAGGACTGGCTGATCGCAGGAGGAAGCTCGGGCGGGAGCGCGGCTGCGGTGGCGGCGGCCACCTGCTT
TGCGGCTTTAGGATCAGACACTGGAGGATCAACCCGAAATCCTGCCGCCCACTGTGGGCTGGTCGGTTTTAAGCCCAGCT
ATGGTTTAGTCTCCCGTTATGGTCTCATTCCCCTGGTGAATTCCATGGATGTGCCAGGAATCTTAACCAGATGTGTGGAC
GATGCAGCAGCTGTATTGGGTGTACTGGCTGGACATGACCCCAAAGATTCTACCACGGTGCAGGATCCAGTTAAACCATT
TGTGCTTCCTAGTTTGACAGATGTGAGCAAACTGTGCGTAGGAATTCCAAAGGAATATCTCGTACCTGAGTTATCCAGTG
AAGTACGATCTCTCTGGTCCAAAGCTGCTGGCCTCTTTGAGTCTGCGGGAGCCAAGGTGATTGACGTATCCCTGCCTCAC
ACCTCGTACTCAATCGTCTGCTACCATGTACTGTGCACATCAGAAGTGGCATCAAACATGGCAAGATTTGATGGGCTAGA
ATATGGTCATAGATGTGACATTAATGAGTCTACTGAAGCCATGTATGCTGCCACCAGGCGGGAAGGGTTCAATGATGTCG
TCAGAGGAAGAATTCTTTCAGGAAACTTTTTCTTATTAAAAGAAAACTATGAAAATTATTTCATCAAAGCCCAGAAAGTG
AGGCGCCTCATCGCAAATGATTTTGTGAATGTCTTTAACTCTGGAGTGGACGTTGTACTGACCCCCACCACCCTGAGTGA
GGCAGTACCATTCTTGGAATTTATCAAAGAAGACAACAGAACTCGGAGTGCCCAAGATGATATTTTCACCCAGGCGGCCA
ACATGGCAGGGGTGCCCGCTGTGAGCGTGCCAGCCGGTCTCTCACCCCAGGGACTGCCGATCGGCCTGCAGTTCATCGCA
CCTGCCTTTGGTGACCAGAAGCTTCTGACAGTTGCCAAATGGTTTGAGAAACAAATACAGTTTCCAGTTACTCAGCTTCA
AGAACTCACAGAGGATTGTCCATCAGGCTTTGAAAATGACAACTCAGCTTCCGTTTTTCTGAAACAGTGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 8 .36 RPM |
| SRP017611_kidney | 23 .66 RPM |
| SRP017611_brain | 12 .77 RPM |
| SRP040447_lung | 11 .83 RPM |
| SRP040447_skeletal_muscle | 14 .19 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000017557 | ortholog_one2one | 3 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000001036 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000006200 | ortholog_one2one | 4 retrogenes | |
| Homo sapiens | ENSG00000130348 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000008261 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000008330 | ortholog_one2many | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000013383 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000016883 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000018462 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_179 | 72.10 | 98.68 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000021670 retrocopies