Parental gene: | ENSDNOG00000007283 |
| Aliases: | None |
| Description: | None |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_7220:10217..69490(+) |
>ENSDNOG00000007283
ATGGTGATGGATGGTCGCGGTGGCAGCATTCCTGAGCAGAAGGAGTCAGTGCTGTTCCTGCGTGACACGTGGCAGAGTGA
TGATTCTGACATTTGGGATGATACAGCATTGATAAAAGCCTATGATAAAGCTGTGGCTTCATTTAAGCATGCTCTGAAGA
ACGGTGACATTTCTGAAGTTTCAAACAAGCCAAAAGGCACACCTAAAAGAAAACCTGTTAAGAAGAATAAAAGCCAAAAA
AAGAACATCACAACTCCATTGAAACAGTGGAAAGTTGGTGACAAATGTTCTGCCATTTGGTCAGAAGATGGCTGCATTTA
CCCAGCTACCATTGCTTCAATTGATTTTAAGAGAGATACCTGCGTCGTGGTTTACACTGGGTATGGAAATAGAGAGGAGC
AAAATCTGTCAGATTTACTTTTCCCAACCTTTGAAGGAGTGAATAATGTAGAACAAAATGCTCAGGAGAATGAAAATGAG
AGTCAACTTTCAACGGATGAAAGTGAGAATTCCTCCAAGTCTCCTGGAAATAAACCAAATAACATAAAGTCAAAAGCTAC
TACATGGAACTCTTTTCTGCCTCCACCACCCCCCATGCCAGGATCTGGACTGGGACCAGGAAAGTCAGGCCTAAAATTCA
ATGGCCCGCCCCCTCCACCTCCACCCCCCTTCCTGTCATGCTGGCTGCCTCCACTTCCTTCTGGACCACCAATACTTCCC
CCTCCACCTCCCATATGTCCAGATTCTTTTGATGATGCTGATGCTTTGGGAAGCATGTTAATCTCTTGGTACATGAGTGG
CTATCATACTGGCTATTACCTG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 15 .56 RPM |
| SRP012922_cerebellum | 15 .26 RPM |
| SRP012922_heart | 7 .66 RPM |
| SRP012922_kidney | 8 .76 RPM |
| SRP012922_liver | 5 .88 RPM |
| SRP012922_lung | 11 .61 RPM |
| SRP012922_quadricep_muscle | 6 .40 RPM |
| SRP012922_spleen | 14 .77 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000012328 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000001406 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000205571 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000026704 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000010603 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000020214 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000004454 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000017097 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000016955 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000016970 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000012288 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000002399 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1239 | 76.09 | 50.36 | Please wait, loading  |
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| 2. | retro_dnov_1613 | 56.76 | 53.65 | Please wait, loading |
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| 3. | retro_dnov_1637 | 97.67 | 62.41 | Please wait, loading |
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| 4. | retro_dnov_2175 | 74.09 | 79.93 | Please wait, loading |
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Download FASTA sequences of all ENSDNOG00000007283 retrocopies