Parental gene:

ENSOCUG00000017097

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL018720:20747..35786(-)


>ENSOCUG00000017097
CTCACTATGGCGATGGGCAGTGGCGGCGGCGGCGTTTCGGAGCCGGAGGACTCGGTGCTGTTCCGGCGCGGAACGGGCCA
GAGTGATGATTCTGACATTTGGGATGATACAGCATTGATAAAAGCTTATGACAAAGCTGTAGCGTCATTTAAGCATGCTC
TGAAGAATGGTGACATTTGTGCAACTTCAGATAAACCTAAAGTCACACCTAAAAGAAAACCTGTTAAGAAGAATAAATGC
CAAAAGAAGAAGACCACAACTGCCTTAAAACAGTGGAAGGTTGGTGACAAATGTTGTGCCATTTGGTCGGAGGACGGCTG
CGTCTACCCAGCTACAATTGCTTCAGTTGATTTTAAGAGAGAAACCTGTGTTGTGGTTTACACTGGATATGGAAACAGAG
AAGAGCAAAATCTGTCTGATCTACTTTCCCCAACATCTGAAGTGGCTAATAACATAGAACACAATGCTCAGGAGAATGAA
AATGAAAGTCAAGTTTCTACAGATGAAAGTGAGAACTCCTCCAGGTCTCCTGGAAGTAAACCAAATAATATCAAGTCAAA
AGCTCATCCTTGGAACTCCTTCCTCCCTCCGCCTCCCCCCATGCCAGGATCAGGAATGGGACCTGGAAAGCCAGGTCTAA
AATTCAGTGCCCACTTCCTGTCATGCTGGCTGCCCCCATTTCCTTCTGGGCCACCAGTAATTCCCCCACCACCTCCCATA
TGTCCAGATTCTCTTGATGATGCTGATGCCTTGGGAAGTATGTTAATCTCTTGGTACATGAGTGGCTATCATACTGGCTA
CTACATGGGCTTCAAGCAAAGTCAGAAAGAAGGAAGATGCTCACATTTCAATTAA

Library Parental gene expression (RPM)
SRP017611_liver 2 .08 RPM
SRP017611_kidney 10 .34 RPM
SRP017611_brain 6 .13 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000012328 ortholog_one2many 1 retrogene
retro_cpor_988,
Dasypus novemcinctus ENSDNOG00000007283 ortholog_one2many 4 retrogenes
retro_dnov_1239, retro_dnov_1613, retro_dnov_1637, retro_dnov_2175,
Echinops telfairi ENSETEG00000001406 ortholog_one2many 2 retrogenes
retro_etel_1549, retro_etel_2012,
Homo sapiens ENSG00000205571 ortholog_many2many 1 retrogene
retro_hsap_4140,
Gorilla gorilla ENSGGOG00000026704 ortholog_many2many 1 retrogene
retro_ggor_2780,
Myotis lucifugus ENSMLUG00000010603 ortholog_one2many 1 retrogene
retro_mluc_1623,
Macaca mulatta ENSMMUG00000020214 ortholog_many2many 1 retrogene
retro_mmul_216,
Nomascus leucogenys ENSNLEG00000004454 ortholog_one2many 1 retrogene
retro_nleu_1054,
Pan troglodytes ENSPTRG00000016955 ortholog_one2many 1 retrogene
retro_ptro_2813,
Sus scrofa ENSSSCG00000016970 ortholog_many2many 1 retrogene
retro_sscr_654,
Ictidomys tridecemlineatus ENSSTOG00000012288 ortholog_one2many 1 retrogene
retro_itri_968,
Tupaia belangeri ENSTBEG00000002399 ortholog_one2many 1 retrogene
retro_tbel_1033,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_617 70.05 65.49
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Download FASTA sequences of all ENSOCUG00000017097 retrocopies