Parental gene: | FAM49B, ENSDNOG00000009323 |
| Aliases: | None |
| Description: | family with sequence similarity 49, member B [Source:HGNC Symbol;Acc:25216] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | scaffold_1709:40072..71606(-) |
>ENSDNOG00000009323
ATGGGGAATCTTCTTAAAGTTTTGACATGCACAGACCTTGAGCAGGGGCCAAATTTTTTCCTTGATTTTGAAANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACTTGC
AGTCATATAGAGGAGCCGGCCATGAAATACGAGAGGCAATCCAGCATCCAGCAGATGAGAAGTTGCAAGAGAAAGCATGG
GGTGCAGTTATTCCACTAGTAGGCAAATTAAAGAAATTTTATGAATTTTCTCAGAGGTTAGAAACAGCATTAAGAGGTCT
TCTGGGAGCCTTGACGAGTACCCCATATTCTCCCACCCAGCATCTAGAGCGAGAGCAGGCTCTTGCTAAACAGTTTGCAG
AAATTCTTCACTTCACACTCCGGTTTGATGAACTCAAGATGACAAATCCTGCCATACAGAATGATTTCAGCTATTACAGA
AGAACATTGAGTCGTATGAGGATTAATAATGTTCCAGCGGAAGGAGAAAATGAAGTAAATAATGAATTGGCAAATCGAAT
GTCTTTATTTTATGCTGAGGCAACCCCGATGCTGAAAACTTTAAGTGATGCCACAACGAAATTTGTATCAGAGAATAAAA
ATTTACCAATAGAAAATACCACGGATTGTTTAAGCACCATGGCTAGTGTGTGCAGAGTCATGCTCGAGACCCCGGAATAC
AGAAGCAGATTTACAAATGAGGAGACGGTGTCCTTCTGCTTGCGGGTCATGGTGGGTGTCATCATCCTCTATGACCACGT
ACATCCCGTGGGAGCATTTGCCAAAACTTCAAAGATTGATATGAAAGGTTGTATCAAAGTTCTCAAGGACCAACCTCCTA
ATAGTGTAGAAGGTCTTCTAAATGCTCTCAGGTACCCAACAAAGCATTTGAATGATGAGACTACCTCCAAGCAAATTAAA
TCC
ATGGGGAATCTTCTTAAAGTTTTGACATGCACAGACCTTGAGCAGGGGCCAAATTTTTTCCTTGATTTTGAAANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACTTGC
AGTCATATAGAGGAGCCGGCCATGAAATACGAGAGGCAATCCAGCATCCAGCAGATGAGAAGTTGCAAGAGAAAGCATGG
GGTGCAGTTATTCCACTAGTAGGCAAATTAAAGAAATTTTATGAATTTTCTCAGAGGTTAGAAACAGCATTAAGAGGTCT
TCTGGGAGCCTTGACGAGTACCCCATATTCTCCCACCCAGCATCTAGAGCGAGAGCAGGCTCTTGCTAAACAGTTTGCAG
AAATTCTTCACTTCACACTCCGGTTTGATGAACTCAAGATGACAAATCCTGCCATACAGAATGATTTCAGCTATTACAGA
AGAACATTGAGTCGTATGAGGATTAATAATGTTCCAGCGGAAGGAGAAAATGAAGTAAATAATGAATTGGCAAATCGAAT
GTCTTTATTTTATGCTGAGGCAACCCCGATGCTGAAAACTTTAAGTGATGCCACAACGAAATTTGTATCAGAGAATAAAA
ATTTACCAATAGAAAATACCACGGATTGTTTAAGCACCATGGCTAGTGTGTGCAGAGTCATGCTCGAGACCCCGGAATAC
AGAAGCAGATTTACAAATGAGGAGACGGTGTCCTTCTGCTTGCGGGTCATGGTGGGTGTCATCATCCTCTATGACCACGT
ACATCCCGTGGGAGCATTTGCCAAAACTTCAAAGATTGATATGAAAGGTTGTATCAAAGTTCTCAAGGACCAACCTCCTA
ATAGTGTAGAAGGTCTTCTAAATGCTCTCAGGTACCCAACAAAGCATTTGAATGATGAGACTACCTCCAAGCAAATTAAA
TCC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 44 .34 RPM |
| SRP012922_cerebellum | 48 .25 RPM |
| SRP012922_heart | 7 .19 RPM |
| SRP012922_kidney | 17 .25 RPM |
| SRP012922_liver | 13 .47 RPM |
| SRP012922_lung | 23 .06 RPM |
| SRP012922_quadricep_muscle | 26 .14 RPM |
| SRP012922_spleen | 58 .03 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dipodomys ordii | ENSDORG00000005160 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000015647 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000015625 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000013690 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000002866 | ortholog_one2one | 3 retrogenes | |
| Sus scrofa | ENSSSCG00000005959 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_896 | 84.50 | 83.80 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_1596 | 74.39 | 50.16 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_1723 | 79.44 | 66.04 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000009323 retrocopies