Parental gene:

FAM49B, ENSFCAG00000015625

Aliases:None
Description:family with sequence similarity 49, member B [Source:HGNC Symbol;Acc:25216]
Organism:Cat (Felis catus)
Coordinates:F2:71227850..71259353(-)


>ENSFCAG00000015625
ATGGGGAATCTTCTTAAAGTTTTGACATGCACAGACCTTGAGCAGGGGCCAAATTTTTCCTTGATTTTGAAAGAAAATGC
CCAGCCTACAGAGTCTGAGAAGGAAATTTATAATCAGGTGAATGTAGTATTAAAAGATGCAGAAGGTATCTTGGAAGATT
TGCAGTCATATAGAGGAGCTGGCCATGAAATACGAGAGGCGATCCAGCATCCAGCAGATGAGAAGTTGCAGGAGAAGGCT
TGGGGCGCGGTTGTTCCACTAGTAGGCAAATTAAAGAAATTTTATGAATTTTCTCAGAGGTTAGAAGCAGCACTAAGAGG
CCTTCTGGGAGCCTTGACCAGTACCCCGTACTCTCCCACGCAGCATCTAGAGCGAGAGCAGGCTCTTGCCAAACAGTTTG
CGGAGATTCTTCACTTCACACTCCGGTTCGACGAACTCAAGATGACAAATCCCGCCATACAGAATGATTTCAGCTATTAC
AGAAGAACATTGAGTCGTATGAGGATTAATAACGTTCCAGCAGAAGGAGAAAATGAAGTAAATAATGAATTGGCAAATCG
AATGTCTTTGTTTTATGCCGAGGCAACCCCAATGCTGAAAACCTTAAGTGACGCCACAACAAAATTTGTATCAGAGAATA
AAAATTTACCAATAGAAAATACCACGGATTGTCTAAGCACCATGGCCAGTGTATGCAGAGTCATGCTCGAAACACCGGAA
TACAGAAGCAGATTTACAAATGAAGAGACAGTGTCATTCTGCTTGAGGGTAATGGTGGGTGTCATCATACTCTATGACCA
CGTACATCCAGTGGGAGCATTTGCCAAAACTTCAAAAATTGATATGAAAGGTTGTATCAAAGTTCTTAAGGACCAACCTC
CCAATAGCGTAGAAGGTCTTCTAAATGCTCTCAGGTACACAACAAAACATTTGAACGATGAGACTACCTCCAAGCAAATC
AGATCCATGCTGCAATAG

Library Parental gene expression (RPM)
SRP017611_brain 75 .64 RPM
SRP017611_kidney 20 .20 RPM
SRP017611_liver 9 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000009323 ortholog_one2one 3 retrogenes
retro_dnov_1596, retro_dnov_1723, retro_dnov_896,
Dipodomys ordii ENSDORG00000005160 ortholog_one2one 1 retrogene
retro_dord_381,
Echinops telfairi ENSETEG00000015647 ortholog_one2one 1 retrogene
retro_etel_1299,
Oryctolagus cuniculus ENSOCUG00000013690 ortholog_one2one 1 retrogene
retro_ocun_953,
Procavia capensis ENSPCAG00000002866 ortholog_one2one 3 retrogenes
retro_pcap_293, retro_pcap_332, retro_pcap_40,
Sus scrofa ENSSSCG00000005959 ortholog_one2one 1 retrogene
retro_sscr_978,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1690 83.68 57.72
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Download FASTA sequences of all ENSFCAG00000015625 retrocopies