Parental gene: | ENO3, ENSDNOG00000011654 |
| Aliases: | None |
| Description: | enolase 3 (beta, muscle) [Source:HGNC Symbol;Acc:3354] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_1665:10821..14312(+) |
>ENSDNOG00000011654
GTCCTGAAGGCTGTGGAACACATCAACAAGACTCTAGGCCCTGCTCTGCTGGAAAAGAAACTAAGCGTCGTGGATCAAGA
AAAAGTTGACAAATTTATGATAGAGCTGGATGGGACCGAGAATAAGTCTAAGTTTGGGGCCAATGCCATCCTGGGCGTGT
CCCTGGCCGTGTGTAAGGCTGGAGCAGCCGAGAAGGGGGTCCCACTCTACAGGCACATCGCAGATCTCGCTGGGAACCCG
GACCTGGTACTCCCAGTGCCAGCTTTCAATGTGATCAATGGGGGCTCCCATGCTGGAAACAAGCTGGCCATGCAGGAGTT
CATGATTCTGCCTGTGGGCGCCAGCTCCTTCAAGGAAGCCATGCGCATTGGCGCTGAGGTCTACCATCACCTCAAAGGGG
TCATCAAGGCCAAGTATGGGAAGGATGCCACCAATGTGGGTGATGAAGGCGGCTTTGCACCCAACATCCTGGAGAACAAT
GAGGCCCTGGAGCTGTTGAAGACGGCCATCCAGGCAGCTGGTTACCCAGACAAGGTGGTGATTGGCATGGACGTGGCAGC
TTCTGAGTTCTATCGCAATGGAAAGTATGATCTTGACTTCAAGTCCCCTGATGACCCCGCACGCCACATCTCTGGGGAGA
AGCTGGGGGATCTGTACAAGAGCTTCATCAAGAACTATCCTGTGGTCTCTATTGAGGATCCTTTTGACCAGGACGACTGG
GCTACTTGGACATCGTTCCTCACGGGGGTCAACATCCAGATCGTGGGGGATGACCTCACAGTCACCAACCCCAAGAGGAT
TGCCCAGGCTGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAAGGTCAACCAGATCGGCTCAGTGACTGAATCCATCC
AAGCCTGCAAACTGGCTCAGTCTAACGGCTGGGGGGTGATGGTGAGCCACCGCTCCGGGGAGACTGAGGACACGTTCATC
GCTGACCTCGTGGTGGGGCTCTGCACCGGGCAGATCAAGACTGGTGCCCCCTGCCGCTCGGAGCGTCTGGCCAAATACAA
CCAGCTCATGAGGATTGAGGAGGCTCTCGGGAACAAGGCTGTCTTTGCTGGGCGCAAGTTCCGTAACCCGAAGGCCAAGT
GA
GTCCTGAAGGCTGTGGAACACATCAACAAGACTCTAGGCCCTGCTCTGCTGGAAAAGAAACTAAGCGTCGTGGATCAAGA
AAAAGTTGACAAATTTATGATAGAGCTGGATGGGACCGAGAATAAGTCTAAGTTTGGGGCCAATGCCATCCTGGGCGTGT
CCCTGGCCGTGTGTAAGGCTGGAGCAGCCGAGAAGGGGGTCCCACTCTACAGGCACATCGCAGATCTCGCTGGGAACCCG
GACCTGGTACTCCCAGTGCCAGCTTTCAATGTGATCAATGGGGGCTCCCATGCTGGAAACAAGCTGGCCATGCAGGAGTT
CATGATTCTGCCTGTGGGCGCCAGCTCCTTCAAGGAAGCCATGCGCATTGGCGCTGAGGTCTACCATCACCTCAAAGGGG
TCATCAAGGCCAAGTATGGGAAGGATGCCACCAATGTGGGTGATGAAGGCGGCTTTGCACCCAACATCCTGGAGAACAAT
GAGGCCCTGGAGCTGTTGAAGACGGCCATCCAGGCAGCTGGTTACCCAGACAAGGTGGTGATTGGCATGGACGTGGCAGC
TTCTGAGTTCTATCGCAATGGAAAGTATGATCTTGACTTCAAGTCCCCTGATGACCCCGCACGCCACATCTCTGGGGAGA
AGCTGGGGGATCTGTACAAGAGCTTCATCAAGAACTATCCTGTGGTCTCTATTGAGGATCCTTTTGACCAGGACGACTGG
GCTACTTGGACATCGTTCCTCACGGGGGTCAACATCCAGATCGTGGGGGATGACCTCACAGTCACCAACCCCAAGAGGAT
TGCCCAGGCTGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAAGGTCAACCAGATCGGCTCAGTGACTGAATCCATCC
AAGCCTGCAAACTGGCTCAGTCTAACGGCTGGGGGGTGATGGTGAGCCACCGCTCCGGGGAGACTGAGGACACGTTCATC
GCTGACCTCGTGGTGGGGCTCTGCACCGGGCAGATCAAGACTGGTGCCCCCTGCCGCTCGGAGCGTCTGGCCAAATACAA
CCAGCTCATGAGGATTGAGGAGGCTCTCGGGAACAAGGCTGTCTTTGCTGGGCGCAAGTTCCGTAACCCGAAGGCCAAGT
GA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 23 .73 RPM |
| SRP012922_cerebellum | 17 .18 RPM |
| SRP012922_heart | 1074 .31 RPM |
| SRP012922_kidney | 9 .86 RPM |
| SRP012922_liver | 2 .94 RPM |
| SRP012922_lung | 52 .23 RPM |
| SRP012922_quadricep_muscle | 4677 .95 RPM |
| SRP012922_spleen | 8 .47 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000011679 | ortholog_one2many | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000007915 | ortholog_one2one | 25 retrogenes |
retro_meug_1019, retro_meug_1341, retro_meug_1483, retro_meug_1540, retro_meug_1566, retro_meug_1605, retro_meug_170, retro_meug_1701, retro_meug_1743, retro_meug_1869, retro_meug_1905, retro_meug_1929, retro_meug_2026, retro_meug_2190, retro_meug_235, retro_meug_269, retro_meug_578, retro_meug_607, retro_meug_637, retro_meug_803, retro_meug_820, retro_meug_906, retro_meug_965, retro_meug_973, retro_meug_976,
|
| Rattus norvegicus | ENSRNOG00000004078 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000002346 | ortholog_one2one | 5 retrogenes | |
| Tarsius syrichta | ENSTSYG00000007066 | ortholog_one2one | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_75 | 63.37 | 52.01 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_1712 | 68.22 | 57.10 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000011654 retrocopies