Parental gene:

CDK1, ENSDNOG00000018590

Aliases:None
Description:cyclin-dependent kinase 1 [Source:HGNC Symbol;Acc:1722]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:scaffold_573:49236..59123(+)


>ENSDNOG00000018590
ACCTATGGCGTTGTGTATAAGGGTAGACACAAAACTACAGGTCAAGTGGTAGCCATGAAGAAAATCAGACTAGAAAGTGA
GGAGGAAGGGGTTCCTAGTACTGCAATTCGGGAAATTTCCCTATTAAAAGAACTTCGTCATCCAAATATAGTCAGTCTTC
AAGATGTGCTTATGCAGGATTCCAGGTTATATCTCATCTTTGAATTTCTTTCCATGGATCTCAAGAAATACTTGGATTCT
ATCCCACCTGGTCAGTTCATGGATTCCTCACTTGTTAAGGTAAAAGCACAGAGTTATTTATACCAAATCCTACAAGGGAT
TGTATTTTGTCACTCTAGAAGAGTTCTTCACAGAGACTTAAAACCTCAGAATTTACTGATTGATGACAAAGGAACAATTA
AACTGGCTGATTTTGGGCTTGCCAGAGCTTTTGGAATACCTATCAGAGTATATACACATGAGGTGGTAACACTCTGGTAT
CGGTCTCCAGAAGTATTGCTTGGGTCAGCTCGCTACTCGACTCCAGTTGACATTTGGAGTATAGGCACTATATTTGCGGA
ATTAGCAACTAAGAAACCGCTTTTCCATGGGGATTCAGAGATTGATCAGCTCTTCAGGATTTTCAGAGCTTTGGGTACCC
CCAATAATGAGGTGTGGCCAGAAGTGGAATCTTTACAAGATTATAAGAATACATTTCCCAAGTGGAAACCAGGAAGCCTA
GCATCTCATGTCAAAAACTTGGATGAAAATGGCTTGGATTTGCTCTCGAAAATGTTGGTCTATGATCCTGCCAAACGAAT
TTCTGGCAAAATGGCACTGAATCATCCATATTTTAATGATTTGGACAATCAGATTAAGAAGATGTAG

Library Parental gene expression (RPM)
SRP012922_ascending_colon 12 .83 RPM
SRP012922_cerebellum 0 .14 RPM
SRP012922_heart 0 .46 RPM
SRP012922_kidney 0 .55 RPM
SRP012922_liver 0 .15 RPM
SRP012922_lung 1 .22 RPM
SRP012922_quadricep_muscle 0 .52 RPM
SRP012922_spleen 28 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007001 ortholog_one2one 2 retrogenes
retro_cjac_1846, retro_cjac_671,
Cavia porcellus ENSCPOG00000005402 ortholog_one2one 3 retrogenes
retro_cpor_1414, retro_cpor_1422, retro_cpor_200,
Dasypus novemcinctus ENSDNOG00000014245 within_species_paralog 1 retrogene
retro_dnov_145,
Equus caballus ENSECAG00000009716 ortholog_one2one 1 retrogene
retro_ecab_637,
Felis catus ENSFCAG00000014972 ortholog_one2one 1 retrogene
retro_fcat_329,
Microcebus murinus ENSMICG00000005793 ortholog_one2many 1 retrogene
retro_mmur_43,
Monodelphis domestica ENSMODG00000017091 ortholog_one2many 1 retrogene
retro_mdom_702,
Rattus norvegicus ENSRNOG00000000632 ortholog_one2one 1 retrogene
retro_rnor_1638,
Tupaia belangeri ENSTBEG00000017549 ortholog_one2one 3 retrogenes
retro_tbel_3309, retro_tbel_807, retro_tbel_812,
Tursiops truncatus ENSTTRG00000001085 ortholog_one2one 2 retrogenes
retro_ttru_1619, retro_ttru_1634,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_265 82.69 53.82
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Download FASTA sequences of all ENSDNOG00000018590 retrocopies