RetrogeneDB ID: | retro_mmur_43 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | GeneScaffold_4817:133269..134124(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMICG00000014972 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMICG00000005793 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 92.25 % |
Parental protein coverage: | 95.61 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | TYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFL |
TYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRHPN.VSLQDVLMQDSRLYLIFEFL | |
Retrocopy | TYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRHPNRVSLQDVLMQDSRLYLIFEFL |
Parental | SMDLKKYLDSIPPGQFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADFGLARAF |
SMDLKKYLDSIPPGQFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADFGLARAF | |
Retrocopy | SMDLKKYLDSIPPGQFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADFGLARAF |
Parental | GIPIRVYTHEVITLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTP |
GIPIRVYTHEV.TLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTP | |
Retrocopy | GIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTP |
Parental | NNEVWPDVE-LQDYKNTFPKWKPGXXXXXXXXXXXXXXXXXXKMLVYDPAKRISGKMALNHPYFNDLDNQ |
NNEVWPDVE.LQDYKNTFPKWKPG..................KMLVYDP.KRISGKMALNHPYFNDLDNQ | |
Retrocopy | NNEVWPDVESLQDYKNTFPKWKPGSLASHVKNLDENGLDLLSKMLVYDPPKRISGKMALNHPYFNDLDNQ |
Parental | IKKM |
IKKM | |
Retrocopy | IKKM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000007001 | 2 retrocopies | |
Cavia porcellus | ENSCPOG00000005402 | 3 retrocopies | |
Dasypus novemcinctus | ENSDNOG00000018590 | 1 retrocopy | |
Equus caballus | ENSECAG00000009716 | 1 retrocopy | |
Felis catus | ENSFCAG00000014972 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000003789 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000005793 | 1 retrocopy |
retro_mmur_43 ,
|
Monodelphis domestica | ENSMODG00000017091 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000000632 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000017549 | 3 retrocopies | |
Tursiops truncatus | ENSTTRG00000001085 | 2 retrocopies |