Parental gene:

CHMP4B, ENSECAG00000008311

Aliases:None
Description:charged multivesicular body protein 4B [Source:HGNC Symbol;Acc:16171]
Organism:Horse (Equus caballus)
Coordinates:22:24738608..24743220(+)


>ENSECAG00000008311
GCGGCCCTCCAGGCGCTGAAACGCAAGAAGAGGTATGAGAAGCAGCTGGCACAGATCGACGGCACACTATCAACCATCGA
GTTCCAGCGAGAGGCCCTGGAGAATGCCAACACCAACACCGAGGTGCTCAAGAACATGGGCTATGCCGCCAAGGCCATGA
AGGCTGCCCACGACAACATGGACATCGATAAAGTTGATGAGTTAATGCAGGACATTGCTGACCAGCAAGAACTTGCAGAG
GAGATTTCAACAGCTATTTCAAAACCTGTAGGGTTTGGAGAAGAGTTTGATGAGGACGAACTCATGGCCGAATTAGAAGA
ACTAGAACAGGAGGAACTAGACAAGAATTTGCTGGAAATCAGTGGACCTGAAACAGTCCCTCTACCAAATGTTCCTTCTA
TAAGCCTACCATCAAAACCCACCAAGAAGAAGGAAGAGGAAGACGACGACATGAAGGAATTGGAGAACTGGGCTGGAACC
ATTTAA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 49 .30 RPM
SRP021940_embryo 56 .44 RPM
SRP021940_cerebellum 92 .65 RPM
SRP021940_testis 67 .97 RPM
SRP021940_placental_villous 92 .08 RPM
SRP021940_articular_cartilage 28 .10 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009038 ortholog_one2one 1 retrogene
retro_amel_1612,
Canis familiaris ENSCAFG00000007478 ortholog_one2one 1 retrogene
retro_cfam_1304,
Choloepus hoffmanni ENSCHOG00000007288 ortholog_one2one 1 retrogene
retro_chof_2518,
Felis catus ENSFCAG00000025893 ortholog_one2one 1 retrogene
retro_fcat_1835,
Homo sapiens ENSG00000101421 ortholog_one2one 1 retrogene
retro_hsap_1339,
Gorilla gorilla ENSGGOG00000007775 ortholog_one2one 1 retrogene
retro_ggor_29,
Macaca mulatta ENSMMUG00000008084 ortholog_one2one 1 retrogene
retro_mmul_2178,
Mustela putorius furo ENSMPUG00000017821 ortholog_one2one 2 retrogenes
retro_mputfur_1302, retro_mputfur_697,
Nomascus leucogenys ENSNLEG00000010020 ortholog_one2one 1 retrogene
retro_nleu_1822,
Pongo abelii ENSPPYG00000010931 ortholog_one2one 1 retrogene
retro_pabe_1111,
Pan troglodytes ENSPTRG00000013408 ortholog_one2one 1 retrogene
retro_ptro_915,
Pteropus vampyrus ENSPVAG00000010293 ortholog_one2one 1 retrogene
retro_pvam_973,
Rattus norvegicus ENSRNOG00000046585 possible_ortholog 1 retrogene
retro_rnor_61,
Tarsius syrichta ENSTSYG00000013212 ortholog_one2one 1 retrogene
retro_tsyr_1453,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_496 90.26 95.03
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Download FASTA sequences of all ENSECAG00000008311 retrocopies