Parental gene:

RNF115, ENSECAG00000009030

Aliases:None
Description:ring finger protein 115 [Source:HGNC Symbol;Acc:18154]
Organism:Horse (Equus caballus)
Coordinates:5:48041379..48088276(+)


>ENSECAG00000009030
GAATATATTTGTCCCAGATGTGATTCTGGCTTTATTGAAGAAGTGACAGACGATTCCAGTTTTTTAGGTGGTGGCGGCAG
CCGGCTAGACAATAGCACATCAACACATTTTGCAGAGCTCTGGGACCATTTGGACCACGCGATGTTTTTCCAAGATTTTA
GACCATTTCTAAGTAGTAATCCACTGGACCAAGATAATAGAGCCAATGAGAGGAGTCACCAAACTCACACTGACTTCTGG
GGACCAAGTCGGCCTCCACGGCTGCCAGTGACTCGGAGATACAGATCACGAGGAAGTACTCGTCCTGATAGATCCCCAGC
TATTGAAGGAATAATACAACAGATCTTTGCAGGATTCTTTGCAAATTCTGCAATTCCTGGGCCACACCCTTTTACCTGGA
GCGGGATGCTGCACTCCAACCCTGGGGACTATGCCTGGGGTCAGACAGGGCTTGATGCCATTGTAACCCAGCTTTTAGGA
CAACTGGAAAATACAGGGCCTCCCCCAGCTGACAAGGAAAAGATCACATCTCTTCCAACAGTGACAGTAACTCAGGAACA
AGTTGATATGGGTTTAGAGTGTCCAGTATGCAAAGAAGATTACACAGTTGAAGAGGAAGTCCGGCAGTTACCCTGCAACC
ACTTCTTCCACAGCAGTTGTATTGTGCCGTGGTTAGAGCTGCATGACACATGTCCTGTATGTAGGAAGAGCTTAAATGGT
GAGGACTCTACTCGGCAAACCCAGAGCTCTGAGGCCTCTGCAAGCAACAGATTTAGCAGTGACAGCCAGCTACATGACCG
ATGGACTTTCTGA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 16 .69 RPM
SRP021940_embryo 14 .45 RPM
SRP021940_cerebellum 20 .41 RPM
SRP021940_testis 10 .10 RPM
SRP021940_placental_villous 14 .10 RPM
SRP021940_articular_cartilage 6 .79 RPM



Species Parental gene accession Homology type Retrogenes number
Macropus eugenii ENSMEUG00000002500 ortholog_one2one 1 retrogene
retro_meug_1546,
Oryctolagus cuniculus ENSOCUG00000003055 ortholog_one2one 1 retrogene
retro_ocun_1138,
Pteropus vampyrus ENSPVAG00000014487 ortholog_one2one 13 retrogenes
retro_pvam_1039, retro_pvam_1096, retro_pvam_1111, retro_pvam_1293, retro_pvam_1295, retro_pvam_1442, retro_pvam_730, retro_pvam_733, retro_pvam_759, retro_pvam_796, retro_pvam_806, retro_pvam_849, retro_pvam_964,
Tarsius syrichta ENSTSYG00000004867 ortholog_one2one 2 retrogenes
retro_tsyr_1734, retro_tsyr_1870,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_459 90.12 59.26
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Download FASTA sequences of all ENSECAG00000009030 retrocopies