Parental gene:

LAMTOR3, ENSECAG00000013569

Aliases:None
Description:late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 [Source:HGNC Symbol;Acc:15606]
Organism:Horse (Equus caballus)
Coordinates:3:39617733..39628537(+)


>ENSECAG00000013569
CTCTTTCAGGATCTAAAGCGATTCCTGTATAAAAAATTACCAAGTGTTGAAGGGCTTCATGCTATTGTTGTGTCAGATAG
AGATGGAGTGCCTGTCATTAAAGTGGCCAATGATAATGCTCCCGAGCATGCTTTGAGACCTGGTTTCTTATCTACTTTTG
CCCTTGCAACAGACCAAGGGAGCAAACTTGGACTTTCAAAAAATAAAAGTATCATCTGTTACTATAACACCTACCAGGTG
GTTCAATTCAATCGTTTACCTTTGGTGGTGAGTTTCATAGCCAGCAGCAATGCCAATACAGGACTAATTGTCAGCCTAGA
AAAGGAACTTGCTCCATTATTTGAAGAATTGAGACAAGTTGTGGAAGTTTCTTAA

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 1 .95 RPM
SRP021940_cerebellum 4 .05 RPM
SRP021940_embryo 5 .06 RPM
SRP021940_placental_villous 6 .64 RPM
SRP021940_synovial_membrane 4 .61 RPM
SRP021940_testis 8 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000995 ortholog_one2one 4 retrogenes
retro_amel_1266, retro_amel_1278, retro_amel_1833, retro_amel_610,
Choloepus hoffmanni ENSCHOG00000013153 ortholog_one2one 7 retrogenes
retro_chof_1167, retro_chof_1236, retro_chof_1266, retro_chof_1536, retro_chof_166, retro_chof_1929, retro_chof_955,
Callithrix jacchus ENSCJAG00000015196 ortholog_one2one 4 retrogenes
retro_cjac_1149, retro_cjac_1821, retro_cjac_2581, retro_cjac_2786,
Cavia porcellus ENSCPOG00000013304 ortholog_one2one 2 retrogenes
retro_cpor_112, retro_cpor_208,
Dasypus novemcinctus ENSDNOG00000025421 ortholog_one2one 14 retrogenes
retro_dnov_1057, retro_dnov_118, retro_dnov_1190, retro_dnov_1332, retro_dnov_137, retro_dnov_2003, retro_dnov_2213, retro_dnov_2597, retro_dnov_2665, retro_dnov_487, retro_dnov_522, retro_dnov_626, retro_dnov_938, retro_dnov_939,
Dipodomys ordii ENSDORG00000015501 ortholog_one2one 5 retrogenes
retro_dord_328, retro_dord_379, retro_dord_546, retro_dord_756, retro_dord_771,
Homo sapiens ENSG00000109270 ortholog_one2one 2 retrogenes
retro_hsap_1190, retro_hsap_3374,
Gorilla gorilla ENSGGOG00000001132 ortholog_one2one 2 retrogenes
retro_ggor_2283, retro_ggor_928,
Loxodonta africana ENSLAFG00000015740 ortholog_one2one 1 retrogene
retro_lafr_480,
Myotis lucifugus ENSMLUG00000006786 ortholog_one2one 2 retrogenes
retro_mluc_2415, retro_mluc_445,
Macaca mulatta ENSMMUG00000006830 ortholog_one2one 1 retrogene
retro_mmul_2104,
Monodelphis domestica ENSMODG00000020688 ortholog_one2one 3 retrogenes
retro_mdom_1133, retro_mdom_455, retro_mdom_907,
Mus musculus ENSMUSG00000091512 possible_ortholog 1 retrogene
retro_mmus_167,
Nomascus leucogenys ENSNLEG00000013684 ortholog_one2one 2 retrogenes
retro_nleu_1936, retro_nleu_965,
Pongo abelii ENSPPYG00000014955 ortholog_one2one 3 retrogenes
retro_pabe_1268, retro_pabe_2772, retro_pabe_991,
Pan troglodytes ENSPTRG00000016310 ortholog_one2one 1 retrogene
retro_ptro_2294,
Pteropus vampyrus ENSPVAG00000017674 ortholog_one2one 1 retrogene
retro_pvam_1378,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_138 61.60 98.39
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Download FASTA sequences of all ENSECAG00000013569 retrocopies