Parental gene:

ENSECAG00000019445

Aliases:None
Description:None
Organism:Horse (Equus caballus)
Coordinates:7:12745684..12754080(-)


>ENSECAG00000019445
TACTTGGCAGACTTTTATGACCTCAAGATGGAGACAATTCCAATGACAAAAATGAGAGTCAATAGGAACTTCATGGAGAA
TAAAATCCAGGAAATGCAGCAGTTCTTAGGGCTAAAAGTGACCGGGCAACTGGACACAGCCACTCTGGACATGATGCACA
GACCTCGATGCGGAGTGCCTGATGTCTATGATTTCAGGGTAATGCAAGGGAGGCCAGTATGGAAGAAACATTTTATCACC
TACAGAATCAAGAATTACACTCCAGACATGAAGCCTGAGGACGTTGACTATGCCATACAGAAAGCTTTTCAAGTGTGGAG
TGATGTGACACCACTGAAGTTCAGAAAGATTAACACAGGCGAGGCTGACATTATGATACAATTTGCACATGGAGCTCATG
GAGACTACAGTCCTTTTGATGGCAGAAATGGAATTCTAGCCCATGCTTTTGGACCTGGACCTGGTATTGGAGGAGACACA
CATTTTGATGAGGCTGAAATCTGGACTAAAAGCTATAAAGGCACAAACTTGTTCCTAGTTGCTGTTCATGAGCTTGGCCA
TTCCTTGGGTCTTGGCCATTCCCATGATCCAAAGGCCATAATGTTCCCCACCTACAGTTATATTGACCTCAGCACATTTC
GCCTCTCTGCTGATGATATACGTGGCATTCAGTCTCTCTATGGAGCCCCAGAAAAGCCTCGACCCTCATCAAAACCTGAC
AGTACAGACCCAACTGTCTGTGACCCCAATATGAGTTTTGATGCTGTCACTACAGTGGGAGATAAAATCTTCTTCTTTAA
AGACAGGTTCTTCTGGAGGAAGCTTCCTAAGAGTCCAGAGATCAACGTTGGTTTAATTTCTTCTTTATGGCCAACCTTAC
CATCTGGCATTCAAGCTGCTTATGAAATTGGAGCCAGAAATCATGTTTTTCTTTTTAAAGATGATAAGTACTGGTTAATC
AGCAATTTAAGACAACAGCCAAACTATCCCAGGAGCATACATTCTTTGGGCTTCCCCTCCCATGTGAAAAAAATTGATGC
AGCTGTTTTTAACCCACATTTCTATAAGACCTACTTCTTTGTGGATAACCAATATTGGAGGTATAATGAGAGGAGACAAC
TCATGGACCCCGGTTATCCCAAACAAACTACCACATACTTCCCAGGAGTTGGGCCTAAAATTGATGGAGTCTTCTATTAT
AACAGATACTACTATTTCCTCCAAGGATCTAACATACTTGAATATGATGTCCTATCTCGCCGCGTCACCAAAATCATGAA
AAGCAATACTGAGCTTGGTTGTTAG

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 1 .02 RPM
SRP021940_embryo 0 .00 RPM
SRP021940_cerebellum 0 .00 RPM
SRP021940_testis 0 .00 RPM
SRP021940_placental_villous 0 .05 RPM
SRP021940_articular_cartilage 1 .18 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000008413 ortholog_one2one 6 retrogenes
retro_chof_1424, retro_chof_1611, retro_chof_2207, retro_chof_325, retro_chof_595, retro_chof_645,
Loxodonta africana ENSLAFG00000010062 ortholog_one2one 1 retrogene
retro_lafr_147,
Macaca mulatta ENSMMUG00000004250 ortholog_one2one 1 retrogene
retro_mmul_2325,
Otolemur garnettii ENSOGAG00000010221 ortholog_one2one 1 retrogene
retro_ogar_965,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_153 69.87 71.20
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Download FASTA sequences of all ENSECAG00000019445 retrocopies