Parental gene:

MMP12, ENSMMUG00000004250

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:14:101482228..101494437(-)


>ENSMMUG00000004250
ATGAAGTTTCTTCTAATACTGCTCCTGCAGGCCACTGCTTCTGGAGCTCTTCCCCTGAACAGCTCTACAAGCCTGGAAAA
AAATAATGTGCTATTTGGTGAAAGATACTTAGAAAGATTTTATGGCCTTGAGATGAACAAATTTCGAGTGACAAAAATGA
AATACAGTGGAAACTTAATGAAGGAAAAAATCCAGGAAATGCAGCACTTCTTGGGGCTGAAAGTGACTGGGCAACTGGAC
ACATCTACTCTGGAGATGATGCACGCACCTCGATGTGGAGTCCCCGACGTCCATCATTTCAGGGCAATGCCAAGGGGGCA
GATATGGAGGAAACATTATATCACCTACAGAATCAATAATTACACACCTGACATGAACCGTAAGGATGTTGACTATGCAA
TCCAGAAAGCTTTCCAAGTATGGAGTAATGTTACCCCCTTGAAATTCAGCAGGATTAACACAGGCGTGGCTGACATTTTG
GTGGTTTTTGCACGTGGAGCTCATGGAGACTTCCATGCTTTTGATGGCAAAGGTGGAACCATAGCCCATGCTTTTGGACC
TGGACCTGGTATTGGAGGGGATGCACATTTTGATGATGATGAATTTTGGACTACACATTCTGAAGGCACAAACTTGTTCC
TCGTTGCTGTTCATGAGCTTGGCCATTCCTTAGGTCTTGGCCATTCCAGTGATCCAAAGGCCATAATGTTCCCCACCTAC
AAATATGTTGACATCAACACATTTCATCTCTCTGCTGATGACATACGTGGCATTCAGTCCCTCTATGGAGGCCCAAAAGA
GCACCAACCGATGCCACAGCCTGACGATTTAGAACCAGCTCTCTGTGACCCCAATTTGAGTTTTGATGCTGTCACTACAG
TGGGAGATAAGATCTTTTTCTTCAAAGACAGGTTCTTCTTGCTGAAGCTTTCTGAGAGACCAGGGACCAGTGTTGATTTA
ATTTCTTCCTTATGGCCAACCTTGCCATCTGGCATTGAAGCCGCTTATGAAATTAAAGCCAGAAATCAAGTTTTTCTTTT
TAAAGATGACAAATACTGGTTAATTAGCAACTTAAGACCACAGTCAGATTATCCCAAGAGCATACATTCTTTTGGTTTTC
CTGACTTTGTGAAAAAAATTGATGCCGCTGTTTTTAACCCACATTTTTATAGGACCTACTTCTTCGTAGACAACCAATAT
TGGAGGTATGATGAAAGGAGACAGATGATGGACCCTGGTTATCCCAAACTGATTACCAAGAACTTCCGAGGAATTGGGCC
TAAAATTGATGCAGTCTTCTACTCTAAAAATAAATACTACTATTTCTTCCAAGGATCTAATCAATTTGAATATGACTTCC
TACTCCAACGTATCACCAAAACACTGAAAAGCAATAGCTGGTTTGAGTGTTAG

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_brain_prefrontal_cortex 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .11 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000008413 ortholog_one2one 6 retrogenes
retro_chof_1424, retro_chof_1611, retro_chof_2207, retro_chof_325, retro_chof_595, retro_chof_645,
Equus caballus ENSECAG00000019445 ortholog_one2one 1 retrogene
retro_ecab_153,
Loxodonta africana ENSLAFG00000010062 ortholog_one2one 1 retrogene
retro_lafr_147,
Otolemur garnettii ENSOGAG00000010221 ortholog_one2one 1 retrogene
retro_ogar_965,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2325 59.34 50.85
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Download FASTA sequences of all ENSMMUG00000004250 retrocopies