Parental gene:

AMMECR1L, ENSECAG00000023095

Aliases:None
Description:AMMECR1-like [Source:HGNC Symbol;Acc:28658]
Organism:Horse (Equus caballus)
Coordinates:18:2938385..2954883(+)


>ENSECAG00000023095
ATGGGAAAAAGACGTTGTGTTCCTCCACTCGAGCCCAAGTTGGCAGCAGGCTGTTGTGGGGTCAAGAAGCCTAAGTTGTC
TGGAAGTGGAACGCACAGTCACGGGAACCAGTCCACAACTGTCCCCGGCTCTAGTTCAGGACCTCTTCAAAACCACCAGC
ATGTGGATGGCAGCAGTGGTCGGGAGAATGTGTCGGACTTAACTCTGGGACCTGGAAACTCTCCCATTACACGAATGAAT
CCCGCATCGGGAGCACTGAGCCCTCTCCCCCGGCCCAACGGAACTGCCAACACCGCCAAGAATCTGGTGGTGACTGCAGA
GATGTGCTGCTACTGCTTTGACGTCCTCTACTGTCACCTCTATGGCTTCCCACAGCCTCGACTTCCTAGATTCACCAATG
ACCCCTATCCGCTCTTTGTGACATGGAAGACAGGGCGGGACAAGCGGCTTCGTGGCTGCATTGGGACCTTCTCAGCCATG
AATCTTCATTCAGGACTCAGGGAATACACGTTAACCAGTGCACTTAAGGACAGCCGATTTCCCCCGCTGACCCGAGAGGA
GCTGCCTAAACTTTTCTGCTCTGTCTCCCTCCTTACTAACTTTGAGGATGCCAGTGATTACCTGGACTGGGAGGTAGGGG
TCCATGGGATTCGAATTGAATTCATCAATGAAAAAGGCGTCAAACGTACAGCCACATACTTACCTGAGGTTGCTAAGGAA
CAAGACTGGGATCAGATCCAGACAATAGACTCCTTGCTTCGAAAAGGTGGCTTTAAGGCTCCAATTACCAGTGAATTCAG
AAAAACCATCAAACTCACCAGGTACCGAAGTGAGAAGGTGACAATCAGTTATGCAGAATATATTGCTTCTCGACAGCACT
GTTTCCAGAATGGCACTCTTCATGCCCCGCCCCTCTACAATCATTACTCCTGA

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 9 .62 RPM
SRP021940_cerebellum 11 .84 RPM
SRP021940_embryo 18 .92 RPM
SRP021940_placental_villous 22 .23 RPM
SRP021940_synovial_membrane 18 .59 RPM
SRP021940_testis 29 .93 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000009373 ortholog_one2one 1 retrogene
retro_chof_1566,
Callithrix jacchus ENSCJAG00000010743 ortholog_one2one 1 retrogene
retro_cjac_383,
Echinops telfairi ENSETEG00000000510 ortholog_one2many 1 retrogene
retro_etel_9,
Homo sapiens ENSG00000144233 ortholog_one2one 1 retrogene
retro_hsap_1227,
Gorilla gorilla ENSGGOG00000014448 ortholog_one2one 1 retrogene
retro_ggor_961,
Myotis lucifugus ENSMLUG00000006871 ortholog_one2one 1 retrogene
retro_mluc_684,
Macaca mulatta ENSMMUG00000001987 ortholog_one2one 1 retrogene
retro_mmul_1302,
Mus musculus ENSMUSG00000041915 ortholog_one2one 2 retrogenes
retro_mmus_1330, retro_mmus_352,
Nomascus leucogenys ENSNLEG00000015793 ortholog_one2one 1 retrogene
retro_nleu_700,
Pan troglodytes ENSPTRG00000012437 ortholog_one2one 1 retrogene
retro_ptro_843,
Sarcophilus harrisii ENSSHAG00000014762 ortholog_one2many 1 retrogene
retro_shar_86,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_1085 74.75 64.52
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Download FASTA sequences of all ENSECAG00000023095 retrocopies