Parental gene: | Ammecr1l, ENSMUSG00000041915 |
| Aliases: | Ammecr1l, 5430429D03Rik, AU022236, AU040755, AW111353, E230022H04Rik |
| Description: | AMME chromosomal region gene 1-like [Source:MGI Symbol;Acc:MGI:2442711] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 18:31759823..31784071(+) |
>ENSMUSG00000041915
ATGGGAAAAAGACGTTGTGTTCCTCCCCTTGAGCCCAAGTTGGCAGCAGGCTGTTGTGGGGTCAAGAAGCCCAAACTATC
TGGAAGTGGAACGCACAGTCACGGGAACCAGTCTACAACTGTTCCTGGCTCAAGTTCAGGACCTCTTCAAAACCACCAGC
ATGTGGACAACAGCAGTGGTCGGGAAAATGTATCGGACTTAACTCTGGGACCTGGAAACTCTCCTATTACACGAATGAAT
ACTGCATCTGGAGCCCTGAGCCCTCTCCCCCGGCCCAATGGAACTGCCAATAGCACTAAGAACCTGGTGGTGACTGCAGA
GATGTGCTGCTACTGCTTTGATGTGCTCTACTGTCACCTCTATGGCTTCCCACAGCCACGGCTTCCTAGATTCACCAATG
ACCCCTATCCTCTCTTTGTGACCTGGAAGACAGGGCGAGACAAGCGGCTTCGTGGCTGCATTGGGACCTTCTCAGCCATG
AATCTTCATTCAGGACTCAGGGAATACACATTAACCAGTGCACTTAAGGACAGCCGATTCCCTCCCCTGACCCGAGAGGA
GCTGCCCAAACTTTTCTGTTCTGTCTCCCTCCTTACTAACTTTGAAGATGCCAGTGACTACCTGGACTGGGAGGTAGGGG
TCCATGGAATTCGGATTGAATTCATCAATGAAAAAGGCATCAAACGCACAGCCACATATTTACCTGAGGTTGCTAAGGAA
CAAGACTGGGATCAGATCCAGACAATAGATTCCTTGCTCAGGAAAGGTGGTTTTAAGGCTCCAATTACCAGTGAATTCAG
AAAATCAATCAAACTCACAAGGTATCGAAGTGAGAAGGTGACAATCAGTTATGCAGAGTATATTGCTTCTCGACAGCACT
GTTTCCAGAATGGCACTCTTCATGCCCCGCCCCTCTACAATCATTACTCCTGA
ATGGGAAAAAGACGTTGTGTTCCTCCCCTTGAGCCCAAGTTGGCAGCAGGCTGTTGTGGGGTCAAGAAGCCCAAACTATC
TGGAAGTGGAACGCACAGTCACGGGAACCAGTCTACAACTGTTCCTGGCTCAAGTTCAGGACCTCTTCAAAACCACCAGC
ATGTGGACAACAGCAGTGGTCGGGAAAATGTATCGGACTTAACTCTGGGACCTGGAAACTCTCCTATTACACGAATGAAT
ACTGCATCTGGAGCCCTGAGCCCTCTCCCCCGGCCCAATGGAACTGCCAATAGCACTAAGAACCTGGTGGTGACTGCAGA
GATGTGCTGCTACTGCTTTGATGTGCTCTACTGTCACCTCTATGGCTTCCCACAGCCACGGCTTCCTAGATTCACCAATG
ACCCCTATCCTCTCTTTGTGACCTGGAAGACAGGGCGAGACAAGCGGCTTCGTGGCTGCATTGGGACCTTCTCAGCCATG
AATCTTCATTCAGGACTCAGGGAATACACATTAACCAGTGCACTTAAGGACAGCCGATTCCCTCCCCTGACCCGAGAGGA
GCTGCCCAAACTTTTCTGTTCTGTCTCCCTCCTTACTAACTTTGAAGATGCCAGTGACTACCTGGACTGGGAGGTAGGGG
TCCATGGAATTCGGATTGAATTCATCAATGAAAAAGGCATCAAACGCACAGCCACATATTTACCTGAGGTTGCTAAGGAA
CAAGACTGGGATCAGATCCAGACAATAGATTCCTTGCTCAGGAAAGGTGGTTTTAAGGCTCCAATTACCAGTGAATTCAG
AAAATCAATCAAACTCACAAGGTATCGAAGTGAGAAGGTGACAATCAGTTATGCAGAGTATATTGCTTCTCGACAGCACT
GTTTCCAGAATGGCACTCTTCATGCCCCGCCCCTCTACAATCATTACTCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 26 .38 RPM |
| SRP007412_cerebellum | 33 .65 RPM |
| SRP007412_heart | 18 .86 RPM |
| SRP007412_kidney | 56 .56 RPM |
| SRP007412_liver | 59 .12 RPM |
| SRP007412_testis | 107 .53 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000009373 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000010743 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000023095 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000000510 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000144233 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000014448 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000006871 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000001987 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015793 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000012437 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000014762 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_352 | 76.28 | 88.06 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_1330 | 79.88 | 51.61 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000041915 retrocopies