Parental gene:

Ammecr1l, ENSMUSG00000041915

Aliases:Ammecr1l, 5430429D03Rik, AU022236, AU040755, AW111353, E230022H04Rik
Description:AMME chromosomal region gene 1-like [Source:MGI Symbol;Acc:MGI:2442711]
Organism:Mouse (Mus musculus)
Coordinates:18:31759823..31784071(+)


>ENSMUSG00000041915
ATGGGAAAAAGACGTTGTGTTCCTCCCCTTGAGCCCAAGTTGGCAGCAGGCTGTTGTGGGGTCAAGAAGCCCAAACTATC
TGGAAGTGGAACGCACAGTCACGGGAACCAGTCTACAACTGTTCCTGGCTCAAGTTCAGGACCTCTTCAAAACCACCAGC
ATGTGGACAACAGCAGTGGTCGGGAAAATGTATCGGACTTAACTCTGGGACCTGGAAACTCTCCTATTACACGAATGAAT
ACTGCATCTGGAGCCCTGAGCCCTCTCCCCCGGCCCAATGGAACTGCCAATAGCACTAAGAACCTGGTGGTGACTGCAGA
GATGTGCTGCTACTGCTTTGATGTGCTCTACTGTCACCTCTATGGCTTCCCACAGCCACGGCTTCCTAGATTCACCAATG
ACCCCTATCCTCTCTTTGTGACCTGGAAGACAGGGCGAGACAAGCGGCTTCGTGGCTGCATTGGGACCTTCTCAGCCATG
AATCTTCATTCAGGACTCAGGGAATACACATTAACCAGTGCACTTAAGGACAGCCGATTCCCTCCCCTGACCCGAGAGGA
GCTGCCCAAACTTTTCTGTTCTGTCTCCCTCCTTACTAACTTTGAAGATGCCAGTGACTACCTGGACTGGGAGGTAGGGG
TCCATGGAATTCGGATTGAATTCATCAATGAAAAAGGCATCAAACGCACAGCCACATATTTACCTGAGGTTGCTAAGGAA
CAAGACTGGGATCAGATCCAGACAATAGATTCCTTGCTCAGGAAAGGTGGTTTTAAGGCTCCAATTACCAGTGAATTCAG
AAAATCAATCAAACTCACAAGGTATCGAAGTGAGAAGGTGACAATCAGTTATGCAGAGTATATTGCTTCTCGACAGCACT
GTTTCCAGAATGGCACTCTTCATGCCCCGCCCCTCTACAATCATTACTCCTGA

Library Parental gene expression (RPM)
SRP007412_brain 26 .38 RPM
SRP007412_cerebellum 33 .65 RPM
SRP007412_heart 18 .86 RPM
SRP007412_kidney 56 .56 RPM
SRP007412_liver 59 .12 RPM
SRP007412_testis 107 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000009373 ortholog_one2one 1 retrogene
retro_chof_1566,
Callithrix jacchus ENSCJAG00000010743 ortholog_one2one 1 retrogene
retro_cjac_383,
Equus caballus ENSECAG00000023095 ortholog_one2one 1 retrogene
retro_ecab_1085,
Echinops telfairi ENSETEG00000000510 ortholog_one2many 1 retrogene
retro_etel_9,
Homo sapiens ENSG00000144233 ortholog_one2one 1 retrogene
retro_hsap_1227,
Gorilla gorilla ENSGGOG00000014448 ortholog_one2one 1 retrogene
retro_ggor_961,
Myotis lucifugus ENSMLUG00000006871 ortholog_one2one 1 retrogene
retro_mluc_684,
Macaca mulatta ENSMMUG00000001987 ortholog_one2one 1 retrogene
retro_mmul_1302,
Nomascus leucogenys ENSNLEG00000015793 ortholog_one2one 1 retrogene
retro_nleu_700,
Pan troglodytes ENSPTRG00000012437 ortholog_one2one 1 retrogene
retro_ptro_843,
Sarcophilus harrisii ENSSHAG00000014762 ortholog_one2many 1 retrogene
retro_shar_86,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_352 76.28 88.06
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2. retro_mmus_1330 79.88 51.61
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Download FASTA sequences of all ENSMUSG00000041915 retrocopies