Parental gene:

HRSP12, ENSEEUG00000014805

Aliases:None
Description:heat-responsive protein 12 [Source:HGNC Symbol;Acc:16897]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_3634:89..20003(-)


>ENSEEUG00000014805
ATGTCGTCCCTGGTCAGAAGAGTGATCAGCACCACGAAAGCCCCAGCGGCCATTGGTCCCTACAGTCAAGCTGTGTTGGT
CGGCAAGACAGTTTATGTTTCGGGACAAGTCGGTATGGACCCCTCAAGTGGACAGCTTGTGCCAGGAGGGGTGACAGCAG
AAACCAAACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTGAAAACAACT
GTTTTGCTGGCTGACATAAATGACTTCAATACTGTCAATGAAATCTACAAGCAGTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAAGGCGTGTTGAGATTGGAGGCATTGCTATTCAAGGACCTTTCACAT
CGATGTTA

Library Parental gene expression (RPM)
SRP017611_liver 122 .83 RPM
SRP017611_kidney 141 .78 RPM
SRP017611_brain 4 .51 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000030250 possible_ortholog 1 retrogene
retro_cfam_668,
Choloepus hoffmanni ENSCHOG00000001278 ortholog_one2one 8 retrogenes
retro_chof_133, retro_chof_1972, retro_chof_2434, retro_chof_2503, retro_chof_2676, retro_chof_380, retro_chof_515, retro_chof_757,
Callithrix jacchus ENSCJAG00000015560 possible_ortholog 2 retrogenes
retro_cjac_1702, retro_cjac_465,
Dasypus novemcinctus ENSDNOG00000025138 ortholog_one2one 3 retrogenes
retro_dnov_1155, retro_dnov_224, retro_dnov_793,
Gorilla gorilla ENSGGOG00000001185 possible_ortholog 1 retrogene
retro_ggor_1153,
Loxodonta africana ENSLAFG00000002078 ortholog_one2one 1 retrogene
retro_lafr_437,
Macaca mulatta ENSMMUG00000011825 possible_ortholog 2 retrogenes
retro_mmul_558, retro_mmul_88,
Monodelphis domestica ENSMODG00000006575 ortholog_one2one 1 retrogene
retro_mdom_319,
Mus musculus ENSMUSG00000022323 ortholog_one2one 1 retrogene
retro_mmus_3584,
Ornithorhynchus anatinus ENSOANG00000021532 ortholog_one2one 1 retrogene
retro_oana_33,
Otolemur garnettii ENSOGAG00000001465 possible_ortholog 3 retrogenes
retro_ogar_2308, retro_ogar_2951, retro_ogar_552,
Ictidomys tridecemlineatus ENSSTOG00000011452 possible_ortholog 4 retrogenes
retro_itri_1591, retro_itri_192, retro_itri_605, retro_itri_894,
Tupaia belangeri ENSTBEG00000002602 ortholog_one2one 10 retrogenes
retro_tbel_1543, retro_tbel_1602, retro_tbel_2450, retro_tbel_2868, retro_tbel_2995, retro_tbel_3589, retro_tbel_421, retro_tbel_621, retro_tbel_888, retro_tbel_953,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_256 61.06 83.09
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Download FASTA sequences of all ENSEEUG00000014805 retrocopies