RetrogeneDB ID: | retro_itri_605 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393305.1:8557062..8557392(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000011452 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 56.52 % |
Parental protein coverage: | 79.72 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | SQAVLVDKTVYISGQIGMDPSSGQLVPGGIAAETKQALTNMGEILKAAGCDFTNVVKATVL-LADMNDFN |
...VLVD.T.YIS.Q.G......QLV.GG.AAET.Q.L.NMGEI.KAAG.DFTN..K.....LA.M.... | |
Retrocopy | TKVVLVDRTTYISEQRG---TNKQLVSGGGAAETEQTLINMGEIMKAAGWDFTNGSKQLLCWLA*MISIL |
Parental | TVNEIYKQYFKSNFPARAAYQVAALPKGARIEIEAVAVQGPLTTA |
T...IYKQYF..NFP.R.....A..PK.A..EIEAVA.QGPLT.A | |
Retrocopy | TMKSIYKQYFNTNFPTRVGHLIA--PKEAYVEIEAVAIQGPLTIA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |