Parental gene: | RPLP0, ENSG00000089157 |
| Aliases: | RPLP0, L10E, LP0, P0, PRLP0, RPP0 |
| Description: | ribosomal protein, large, P0 [Source:HGNC Symbol;Acc:10371] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 12:120634488..120639038(-) |
>ENSG00000089157
ATGCCCAGGGAAGACAGGGCGACCTGGAAGTCCAACTACTTCCTTAAGATCATCCAACTATTGGATGATTATCCGAAATG
TTTCATTGTGGGAGCAGACAATGTGGGCTCCAAGCAGATGCAGCAGATCCGCATGTCCCTTCGCGGGAAGGCTGTGGTGC
TGATGGGCAAGAACACCATGATGCGCAAGGCCATCCGAGGGCACCTGGAAAACAACCCAGCTCTGGAGAAACTGCTGCCT
CATATCCGGGGGAATGTGGGCTTTGTGTTCACCAAGGAGGACCTCACTGAGATCAGGGACATGTTGCTGGCCAATAAGGT
GCCAGCTGCTGCCCGTGCTGGTGCCATTGCCCCATGTGAAGTCACTGTGCCAGCCCAGAACACTGGTCTCGGGCCCGAGA
AGACCTCCTTTTTCCAGGCTTTAGGTATCACCACTAAAATCTCCAGGGGCACCATTGAAATCCTGAGTGATGTGCAGCTG
ATCAAGACTGGAGACAAAGTGGGAGCCAGCGAAGCCACGCTGCTGAACATGCTCAACATCTCCCCCTTCTCCTTTGGGCT
GGTCATCCAGCAGGTGTTCGACAATGGCAGCATCTACAACCCTGAAGTGCTTGATATCACAGAGGAAACTCTGCATTCTC
GCTTCCTGGAGGGTGTCCGCAATGTTGCCAGTGTCTGTCTGCAGATTGGCTACCCAACTGTTGCATCAGTACCCCATTCT
ATCATCAACGGGTACAAACGAGTCCTGGCCTTGTCTGTGGAGACGGATTACACCTTCCCACTTGCTGAAAAGGTCAAGGC
CTTCTTGGCTGATCCATCTGCCTTTGTGGCTGCTGCCCCTGTGGCTGCTGCCACCACAGCTGCTCCTGCTGCTGCTGCAG
CCCCAGCTAAGGTTGAAGCCAAGGAAGAGTCGGAGGAGTCGGACGAGGATATGGGATTTGGTCTCTTTGACTAA
ATGCCCAGGGAAGACAGGGCGACCTGGAAGTCCAACTACTTCCTTAAGATCATCCAACTATTGGATGATTATCCGAAATG
TTTCATTGTGGGAGCAGACAATGTGGGCTCCAAGCAGATGCAGCAGATCCGCATGTCCCTTCGCGGGAAGGCTGTGGTGC
TGATGGGCAAGAACACCATGATGCGCAAGGCCATCCGAGGGCACCTGGAAAACAACCCAGCTCTGGAGAAACTGCTGCCT
CATATCCGGGGGAATGTGGGCTTTGTGTTCACCAAGGAGGACCTCACTGAGATCAGGGACATGTTGCTGGCCAATAAGGT
GCCAGCTGCTGCCCGTGCTGGTGCCATTGCCCCATGTGAAGTCACTGTGCCAGCCCAGAACACTGGTCTCGGGCCCGAGA
AGACCTCCTTTTTCCAGGCTTTAGGTATCACCACTAAAATCTCCAGGGGCACCATTGAAATCCTGAGTGATGTGCAGCTG
ATCAAGACTGGAGACAAAGTGGGAGCCAGCGAAGCCACGCTGCTGAACATGCTCAACATCTCCCCCTTCTCCTTTGGGCT
GGTCATCCAGCAGGTGTTCGACAATGGCAGCATCTACAACCCTGAAGTGCTTGATATCACAGAGGAAACTCTGCATTCTC
GCTTCCTGGAGGGTGTCCGCAATGTTGCCAGTGTCTGTCTGCAGATTGGCTACCCAACTGTTGCATCAGTACCCCATTCT
ATCATCAACGGGTACAAACGAGTCCTGGCCTTGTCTGTGGAGACGGATTACACCTTCCCACTTGCTGAAAAGGTCAAGGC
CTTCTTGGCTGATCCATCTGCCTTTGTGGCTGCTGCCCCTGTGGCTGCTGCCACCACAGCTGCTCCTGCTGCTGCTGCAG
CCCCAGCTAAGGTTGAAGCCAAGGAAGAGTCGGAGGAGTCGGACGAGGATATGGGATTTGGTCTCTTTGACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 442 .56 RPM |
| bodymap2_lung | 667 .16 RPM |
| bodymap2_breast | 427 .83 RPM |
| bodymap2_adipose | 635 .70 RPM |
| bodymap2_adrenal | 730 .78 RPM |
| bodymap2_skeletal_muscle | 558 .44 RPM |
| bodymap2_thyroid | 482 .21 RPM |
| bodymap2_prostate | 1087 .79 RPM |
| bodymap2_colon | 773 .41 RPM |
| bodymap2_testis | 383 .53 RPM |
| bodymap2_brain | 82 .65 RPM |
| bodymap2_heart | 202 .81 RPM |
| bodymap2_white_blood_cells | 841 .10 RPM |
| bodymap2_lymph_node | 1096 .55 RPM |
| bodymap2_ovary | 707 .90 RPM |
| bodymap2_kidney | 471 .29 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000005144 | possible_ortholog | 4 retrogenes | |
| Canis familiaris | ENSCAFG00000010227 | possible_ortholog | 5 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000002745 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000008677 | ortholog_one2one | 3 retrogenes | |
| Cavia porcellus | ENSCPOG00000021812 | possible_ortholog | 5 retrogenes | |
| Equus caballus | ENSECAG00000015816 | possible_ortholog | 2 retrogenes | |
| Felis catus | ENSFCAG00000013354 | possible_ortholog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000026582 | ortholog_one2one | 5 retrogenes | |
| Myotis lucifugus | ENSMLUG00000001970 | possible_ortholog | 11 retrogenes | |
| Macaca mulatta | ENSMMUG00000009157 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000067274 | possible_ortholog | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000005749 | possible_ortholog | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000003843 | ortholog_one2one | 4 retrogenes | |
| Procavia capensis | ENSPCAG00000016429 | ortholog_one2one | 6 retrogenes | |
| Petromyzon marinus | ENSPMAG00000001339 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000005022 | ortholog_one2one | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000001148 | possible_ortholog | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000001623 | possible_ortholog | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000005658 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_512 | 84.58 | 86.23 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_784 | 89.82 | 86.75 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_1403 | 85.78 | 70.98 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_1553 | 86.73 | 66.25 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_hsap_1889 | 83.33 | 53.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_hsap_2095 | 98.11 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_hsap_2334 | 68.38 | 72.56 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000089157 retrocopies