Parental gene:

GAR1, ENSG00000109534

Aliases:GAR1, NOLA1
Description:GAR1 ribonucleoprotein homolog (yeast) [Source:HGNC Symbol;Acc:14264]
Organism:Human (Homo sapiens)
Coordinates:4:110736665..110745893(+)


>ENSG00000109534
ATGTCTTTTCGAGGCGGAGGTCGTGGAGGCTTTAATCGAGGTGGTGGAGGTGGCGGCTTCAACCGAGGTGGCAGCAGCAA
CCACTTCCGAGGTGGAGGCGGCGGTGGAGGCGGCGGCAATTTCAGAGGCGGCGGCAGGGGAGGATTTGGACGAGGGGGTG
GCCGCGGAGGCTTTAACAAAGGCCAAGACCAAGGACCTCCAGAACGTGTAGTCTTATTAGGAGAGTTCCTGCATCCCTGT
GAAGATGACATAGTTTGTAAATGTACCACAGATGAAAATAAGGTGCCTTATTTCAATGCTCCTGTTTACTTAGAAAACAA
AGAACAAATTGGAAAAGTGGATGAAATATTTGGACAACTCAGAGATTTTTATTTTTCAGTTAAGTTGTCAGAAAACATGA
AGGCTTCATCCTTTAAAAAACTACAGAAGTTTTATATAGACCCATATAAGCTGCTGCCACTGCAGAGGTTTTTACCTCGA
CCTCCAGGTGAGAAAGGACCTCCAAGAGGTGGTGGCAGGGGAGGCCGAGGAGGAGGAAGAGGAGGAGGTGGCAGAGGTGG
TGGCAGAGGCGGTGGTTTTAGAGGTGGAAGAGGAGGTGGAGGTGGGGGCTTCAGAGGAGGAAGAGGTGGTGGTTTCAGAG
GGAGAGGACATTAA

Library Parental gene expression (RPM)
bodymap2_liver 6 .65 RPM
bodymap2_lung 6 .84 RPM
bodymap2_breast 30 .93 RPM
bodymap2_adipose 23 .24 RPM
bodymap2_adrenal 32 .87 RPM
bodymap2_skeletal_muscle 6 .80 RPM
bodymap2_thyroid 27 .12 RPM
bodymap2_prostate 12 .76 RPM
bodymap2_colon 23 .84 RPM
bodymap2_testis 30 .50 RPM
bodymap2_brain 17 .98 RPM
bodymap2_heart 6 .04 RPM
bodymap2_white_blood_cells 11 .93 RPM
bodymap2_lymph_node 9 .54 RPM
bodymap2_ovary 46 .63 RPM
bodymap2_kidney 17 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004605 ortholog_one2one 2 retrogenes
retro_amel_1932, retro_amel_682,
Gorilla gorilla ENSGGOG00000008681 ortholog_one2one 1 retrogene
retro_ggor_2144,
Myotis lucifugus ENSMLUG00000003776 ortholog_one2one 1 retrogene
retro_mluc_1866,
Macaca mulatta ENSMMUG00000021225 ortholog_one2one 1 retrogene
retro_mmul_1992,
Mustela putorius furo ENSMPUG00000008615 ortholog_one2one 2 retrogenes
retro_mputfur_1491, retro_mputfur_689,
Mus musculus ENSMUSG00000028010 ortholog_one2one 1 retrogene
retro_mmus_2012,
Nomascus leucogenys ENSNLEG00000016578 ortholog_one2one 1 retrogene
retro_nleu_2251,
Oryctolagus cuniculus ENSOCUG00000003901 ortholog_one2one 1 retrogene
retro_ocun_414,
Otolemur garnettii ENSOGAG00000004693 ortholog_one2one 1 retrogene
retro_ogar_1017,
Ochotona princeps ENSOPRG00000012089 ortholog_one2one 1 retrogene
retro_opri_1168,
Pongo abelii ENSPPYG00000014996 ortholog_one2one 1 retrogene
retro_pabe_2586,
Pan troglodytes ENSPTRG00000016364 ortholog_one2one 1 retrogene
retro_ptro_2119,
Tarsius syrichta ENSTSYG00000013668 ortholog_one2one 2 retrogenes
retro_tsyr_355, retro_tsyr_613,
Tursiops truncatus ENSTTRG00000016318 ortholog_one2one 1 retrogene
retro_ttru_1539,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3130 83.50 94.93
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Download FASTA sequences of all ENSG00000109534 retrocopies