Parental gene:

KLHL12, ENSG00000117153

Aliases:KLHL12, C3IP1, DKIR, hDKIR
Description:kelch-like family member 12 [Source:HGNC Symbol;Acc:19360]
Organism:Human (Homo sapiens)
Coordinates:1:202860227..202897764(-)


>ENSG00000117153
ATGGGAGGCATTATGGCCCCCAAAGACATAATGACAAATACTCATGCTAAATCCATCCTCAATTCAATGAACTCCCTCAG
GAAGAGCAATACCCTCTGTGATGTGACATTGAGAGTAGAGCAGAAAGACTTCCCTGCCCATCGGATTGTGCTGGCTGCCT
GTAGTGATTACTTCTGTGCCATGTTCACTAGTGAGCTCTCAGAGAAGGGGAAACCTTATGTTGACATCCAAGGTTTGACT
GCCTCTACCATGGAAATTTTATTGGACTTTGTGTACACAGAAACAGTACATGTGACAGTGGAGAATGTACAAGAACTGCT
TCCTGCAGCCTGTCTGCTTCAGTTGAAAGGTGTGAAACAAGCCTGCTGTGAGTTCTTAGAAAGTCAGTTGGACCCTTCTA
ATTGCCTGGGTATTAGGGATTTTGCTGAAACCCACAATTGTGTTGACCTGATGCAAGCAGCTGAGGTTTTTAGCCAGAAG
CATTTTCCTGAAGTGGTACAGCATGAAGAGTTCATTCTTCTGAGTCAAGGAGAGGTGGAAAAGCTAATCAAGTGCGACGA
AATTCAGGTGGATTCTGAAGAGCCAGTCTTTGAGGCTGTCATCAACTGGGTGAAGCATGCCAAGAAAGAGCGGGAAGAAT
CCTTGCCTAACCTGCTACAGTATGTGCGGATGCCCCTACTAACCCCCAGGTATATCACAGATGTAATAGATGCTGAGCCT
TTCATCCGCTGTAGTTTACAATGCAGGGATCTGGTTGATGAAGCAAAGAAGTTTCATCTGAGGCCTGAACTTCGGAGTCA
GATGCAGGGACCCAGGACAAGGGCTCGCCTAGGAGCCAATGAAGTGCTTTTGGTGGTTGGGGGCTTTGGAAGCCAGCAGT
CTCCCATTGATGTGGTAGAGAAATATGACCCCAAGACTCAGGAGTGGAGCTTTTTGCCAAGCATCACTCGTAAGAGACGT
TATGTGGCCTCAGTGTCCCTTCATGACCGGATCTACGTCATTGGTGGCTATGATGGCCGTTCCCGCCTTAGTTCAGTGGA
ATGTCTAGACTACACAGCAGATGAGGATGGGGTCTGGTATTCTGTGGCCCCTATGAATGTCCGACGAGGTCTTGCTGGAG
CCACCACCCTGGGAGATATGATCTATGTCTCTGGAGGCTTTGATGGAAGCAGGCGTCACACCAGTATGGAGCGCTATGAT
CCAAACATTGACCAGTGGAGCATGCTGGGAGATATGCAGACAGCCCGGGAAGGTGCCGGACTCGTAGTGGCCAGTGGAGT
GATCTACTGTCTAGGAGGATATGACGGCTTGAATATCTTAAATTCAGTTGAGAAATACGACCCTCATACAGGACATTGGA
CTAATGTTACACCAATGGCCACCAAGCGTTCTGGTGCAGGAGTAGCCCTGCTGAATGACCATATTTATGTGGTGGGGGGA
TTTGATGGTACAGCCCACCTTTCTTCCGTTGAAGCATACAACATTCGCACTGATTCCTGGACAACTGTCACCAGTATGAC
CACTCCACGATGCTATGTAGGGGCCACAGTGCTTCGGGGGAGACTCTATGCAATTGCAGGATATGATGGTAATTCCCTGC
TAAGTAGCATTGAATGTTATGACCCTATCATCGACAGCTGGGAAGTCGTGACATCCATGGGAACCCAGCGCTGTGATGCT
GGTGTTTGTGTTCTCCGCGAGAAGTGA

Library Parental gene expression (RPM)
bodymap2_liver 13 .71 RPM
bodymap2_lung 13 .01 RPM
bodymap2_breast 37 .49 RPM
bodymap2_adipose 32 .94 RPM
bodymap2_adrenal 31 .97 RPM
bodymap2_skeletal_muscle 13 .46 RPM
bodymap2_thyroid 42 .41 RPM
bodymap2_prostate 42 .38 RPM
bodymap2_colon 25 .50 RPM
bodymap2_testis 97 .28 RPM
bodymap2_brain 41 .91 RPM
bodymap2_heart 22 .19 RPM
bodymap2_white_blood_cells 42 .72 RPM
bodymap2_lymph_node 27 .83 RPM
bodymap2_ovary 52 .72 RPM
bodymap2_kidney 50 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000006231 ortholog_one2one 1 retrogene
retro_cjac_2151,
Dasypus novemcinctus ENSDNOG00000010436 ortholog_one2one 1 retrogene
retro_dnov_2190,
Echinops telfairi ENSETEG00000007800 ortholog_one2one 2 retrogenes
retro_etel_2103, retro_etel_723,
Macaca mulatta ENSMMUG00000017849 ortholog_one2one 1 retrogene
retro_mmul_612,
Nomascus leucogenys ENSNLEG00000018103 ortholog_one2one 1 retrogene
retro_nleu_2795,
Otolemur garnettii ENSOGAG00000014771 ortholog_one2one 1 retrogene
retro_ogar_1552,
Pongo abelii ENSPPYG00000000343 ortholog_one2one 1 retrogene
retro_pabe_1872,
Pan troglodytes ENSPTRG00000001861 ortholog_one2one 1 retrogene
retro_ptro_1483,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2545 91.54 93.31
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Download FASTA sequences of all ENSG00000117153 retrocopies