Parental gene:

KLHL12, ENSPPYG00000000343

Aliases:None
Description:kelch-like family member 12 [Source:HGNC Symbol;Acc:19360]
Organism:Orangutan (Pongo abelii)
Coordinates:1:47381681..47409741(+)


>ENSPPYG00000000343
GGAGGCATTATGGCCCCCAAAGACATAATGACAAATACTCATGCTAAATCCATCCTCAATTCAATGAACTCCCTCAGGAA
GAGCAATACCTCTGTTGATGTGACATTGAGAGTAGAGCAGAAAGACTTCCCCTGCCATCGGATTGTGCTGGCTGCCTGTA
GTGATTACTTCTGTGCCATGTTCACTAGTGAGCTCTCAGAGAAGGGGAAACCTTATGTTGACATCCAAGGTTTGACTGCC
TCTACCATGGAAATTTTATTGGACTTTGTGTACACAGAAACAGTACATGTGACAGTGGAGAATGTACAAGAACTGCTTCC
TGCAGCCTGTCTGCTTCAGTTGAAAGGTGTGAAACAAGCCTGCTGTGAGTTCTTAGAAAGTCAGTTGGACCCTTCTAATT
GCCTGGGTATTAGGGATTTTGCTGAAACCCACAATTGTGTTGACCTGATGCAAGCAGCTGAGGTTTTTAGCCAGAAGCAT
TTTCCTGAAGTGGTACAGCATGAAGAGTTCATTCCTCTGAGTCAAGGAGAGGTGGAAAAGCTAATCAAGTGCGATGAAAT
TCAGGTGGATTCTGAAGAGCCAGTCTTTGAGGCTGTCATCAACTGGGTGAAGCATGCCAAGAAAGAGCGGGAAGAATCCT
TGCCTAACCTGCTACAGTATGTGCGGATGCCCCTGCTAACCCCCAGGTATATCACAGATGTAATAGATGCTGAGCCTTTC
ATCCGCTGTAGTTTACAATGCAGGGATCTGGTTGATGAAGCAAAGAAGTTTCATCTGAGGCCTGAACTTCGGAGTCAGAT
GCAGGGACCCAGGACAAGGGCTCGCCTAGGAGCCAATGAAGTGCTTTTGGTGGTTGGGGGCTTCGGAAGCCAGCAGTCTC
CCATTGACGTGGTAGAGAAATATGACCCCAAGACTCAGGAGTGGAGCTTTTTGCCAAGCATCACTCGTAAGAGACGTTAT
GTGGCCTCAGTGTCCCTACATGACCGGATCTACGTCATTGGTGGCTATGATGGCCGTTCCCGCCTTAGTTCAGTGGAATG
TCTAGACTACACAGCAGATGAGGATGGGGTCTGGTATTCTGTGGCCCCTATGAATGTCCGACGAGGTCTTGCTGGAGCCA
CCACCCTGGGAGATATGATCTATGTCTCTGGAGGCTTTGATGGAAGCAGGCGTCACACTAGTATGGAGCGGTATGATCCA
AACATTGACCAGTGGAGCATGCTGGGAGATATGCAGACAGCCCGGGAAGGTGCCGGACTCGTAGTGGCCAGTGGAATGAT
CTACTGTCTAGGAGGATATGACGGCTTGAATATCTTAAATTCAGTTGAGAAATACGACCCTCATACAGGACATTGGACTA
ATGTTACACCAATGGCCACCAAGCGTTCTGGTGCAGGAGTAGCCCTGCTGAATGACCATATTTATGTGGTGGGGGGATTT
GATGGTACAGCCCACCTTTCTTCCGTTGAAGCATACAACATTCGCACTGATTCCTGGACAACTGTCACCAGTATGACCAC
TCCACGATGCTATGTAGGGGCCACAGTGCTTCGGGGGAGACTCTATGCAATTGCAGGATATGATGGTAATTCCCTGCTAA
GTAGCATTGAATGTTATGACCCTATCATCGACAGCTGGGAAGTCGTGACATCCATGGGAACCCAGCGCTGTGATGCTGGT
GTTTGTGTTCTCCGCGAGAAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 39 .98 RPM
SRP007412_cerebellum 28 .21 RPM
SRP007412_heart 12 .97 RPM
SRP007412_kidney 27 .64 RPM
SRP007412_liver 21 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000006231 ortholog_one2one 1 retrogene
retro_cjac_2151,
Dasypus novemcinctus ENSDNOG00000010436 ortholog_one2one 1 retrogene
retro_dnov_2190,
Echinops telfairi ENSETEG00000007800 ortholog_one2one 2 retrogenes
retro_etel_2103, retro_etel_723,
Homo sapiens ENSG00000117153 ortholog_one2one 1 retrogene
retro_hsap_2545,
Macaca mulatta ENSMMUG00000017849 ortholog_one2one 1 retrogene
retro_mmul_612,
Nomascus leucogenys ENSNLEG00000018103 ortholog_one2one 1 retrogene
retro_nleu_2795,
Otolemur garnettii ENSOGAG00000014771 ortholog_one2one 1 retrogene
retro_ogar_1552,
Pan troglodytes ENSPTRG00000001861 ortholog_one2one 1 retrogene
retro_ptro_1483,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1872 90.33 100.00
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Download FASTA sequences of all ENSPPYG00000000343 retrocopies