Parental gene:

KLHL12, ENSPTRG00000001861

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:1:181689422..181726370(-)


>ENSPTRG00000001861
ATGGGAGGCATTATGGCCCCCAAAGACATAATGACAAATACTCATGCTAAATCCATCCTCAATTCAATGAACTCCCTCAG
GAAGAGCAATACCCTCTGTGATGTGACATTGAGAGTAGAGCAGAAAGACTTCCCTGCCCATCGGATTGTGCTGGCTGCCT
GTAGTGATTACTTCTGTGCTATGTTCACTAGTGAGCTCTCAGAGAAGGGGAAACCTTATGTTGACATCCAAGGTTTGACT
GCCTCTACCATGGAAATTTTATTGGACTTTGTGTACACAGAAACAGTACATGTGACAGTGGAGAATGTACAAGAACTGCT
TCCTGCAGCCTGTCTGCTTCAGTTGAAAGGTGTGAAACAAGCCTGCTGTGAGTTCTTAGAAAGTCAGTTGGACCCTTCTA
ATTGCCTGGGTATTAGGGATTTTGCTGAAACCCACAATTGTGTTGACCTGATGCAAGCAGCTGAGGTTTTTAGCCAGAAG
CATTTTCCTGAAGTGGTACAGCATGAAGAGTTCATTCTTCTGAGTCAAGGAGAGGTGGAAAAGCTAATCAAGTGTGATGA
AATTCAGGTGGATTCTGAAGAGCCAGTCTTTGAGGCTGTCATCAACTGGGTGAAGCATGCCAAGAAAGAGCGGGAAGAAT
CCTTGCCTAACCTGCTACAGTATGTGCGGATGCCCCTACTAACCCCCAGGTATATCACAGATGTAATAGATGCTGAGCCT
TTTATCCGCTGTAGTTTACAATGCAGGGATCTGGTTGATGAAGCAAAGAAGTTTCATCTGAGGCCTGAACTTCGGAGTCA
GATGCAGGGACCCAGGACAAGGGCTCGCCTAGGAGCCAATGAAGTGCTTTTGGTGGTTGGGGGCTTCGGAAGCCAGCAGT
CTCCCATTGATGTGGTAGAGAAATATGACCCCAAGACTCAGGAGTGGAGCTTTTTGCCAAGCATCACTCGTAAGAGACGT
TATGTGGCCTCAGTGTCCCTTCATGACCGGATCTACGTCATTGGTGGCTATGATGGCCGTTCCCGCCTTAGTTCAGTGGA
ATGTCTAGACTACACAGCAGATGAGGATGGGGTCTGGTATTCTGTGGCCCCTATGAATGTCCGACGAGGTCTTGCTGGAG
CCACCACCCTGGGAGATATGATCTATGTCTCTGGAGGCTTTGATGGAAGCAGGCGTCACACCAGTATGGAGCGGTATGAT
CCAAACATTGACCAGTGGAGCATGCTGGGAGATATGCAGACAGCCCGGGAAGGTGCCGGACTCGTAGTGGCCAGTGGAGT
GATCTACTGTCTAGGAGGATATGACGGCTTGAATATCTTAAATTCAGTTGAGAAATATGACCCTCATACAGGACATTGGA
CTAATGTTACACCAATGGCCACCAAGCGTTCTGGTGCAGGAGTAGCCCTGCTGAATGACCATATTTATGTGGTGGGGGGA
TTTGATGGTACAGCCCACCTTTCTTCCGTTGAAGCATACAACATTCGCACTGATTCCTGGACAACTGTCACCAGTATGAC
CACTCCACGATGCTATGTAGGGGCCACAGTGCTTCGGGGGAGACTCTATGCAATTGCAGGATATGATGGTAATTCCCTGC
TAAGTAGCATTGAATGTTATGACCCTATCATCGACAGCTGGGAAGTCGTGACATCCATGGGAACCCAGCGCTGTGATGCT
GGTGTTTGTGTTCTCCGCGAGAAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 49 .21 RPM
SRP007412_cerebellum 59 .19 RPM
SRP007412_heart 25 .42 RPM
SRP007412_kidney 62 .84 RPM
SRP007412_liver 31 .52 RPM
SRP007412_testis 115 .82 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000006231 ortholog_one2one 1 retrogene
retro_cjac_2151,
Dasypus novemcinctus ENSDNOG00000010436 ortholog_one2one 1 retrogene
retro_dnov_2190,
Echinops telfairi ENSETEG00000007800 ortholog_one2one 2 retrogenes
retro_etel_2103, retro_etel_723,
Homo sapiens ENSG00000117153 ortholog_one2one 1 retrogene
retro_hsap_2545,
Macaca mulatta ENSMMUG00000017849 ortholog_one2one 1 retrogene
retro_mmul_612,
Nomascus leucogenys ENSNLEG00000018103 ortholog_one2one 1 retrogene
retro_nleu_2795,
Otolemur garnettii ENSOGAG00000014771 ortholog_one2one 1 retrogene
retro_ogar_1552,
Pongo abelii ENSPPYG00000000343 ortholog_one2one 1 retrogene
retro_pabe_1872,
Pan troglodytes ENSPTRG00000015989 other_paralog 1 retrogene
retro_ptro_1602,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1483 92.09 93.31
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Download FASTA sequences of all ENSPTRG00000001861 retrocopies