Parental gene:

PANK3, ENSG00000120137

Aliases:None
Description:pantothenate kinase 3 [Source:HGNC Symbol;Acc:19365]
Organism:Human (Homo sapiens)
Coordinates:5:167975499..168006605(-)


>ENSG00000120137
ATGAAGATCAAAGATGCCAAGAAACCCTCTTTCCCATGGTTTGGCATGGACATTGGGGGAACTCTAGTAAAGCTCTCGTA
CTTTGAACCTATTGATATCACAGCAGAGGAAGAGCAAGAAGAAGTTGAGAGTTTAAAAAGTATTCGGAAATATTTGACTT
CTAACGTGGCATATGGATCCACCGGCATTCGGGATGTACACCTTGAACTGAAAGATTTAACACTTTTTGGCCGAAGAGGG
AACTTGCACTTTATCAGGTTTCCAACCCAGGACCTGCCTACTTTTATCCAAATGGGAAGAGATAAAAACTTCTCAACATT
GCAGACGGTGCTATGTGCTACAGGAGGTGGTGCTTACAAGTTTGAAAAAGATTTTCGCACAATTGGAAACCTCCACCTGC
ACAAACTGGATGAACTTGACTGCCTTGTAAAGGGCTTGCTGTATATAGACTCTGTCAGTTTCAATGGACAAGCCGAGTGC
TATTATTTTGCTAATGCCTCAGAACCTGAGCGATGCCAAAAGATGCCTTTTAACCTGGATGATCCCTATCCACTGCTTGT
AGTGAACATTGGCTCAGGAGTCAGTATTTTAGCAGTCCATTCCAAAGACAACTATAAACGAGTGACTGGGACAAGCCTTG
GAGGGGGTACCTTTCTGGGTTTATGCAGTTTATTGACTGGCTGTGAAAGTTTTGAAGAGGCTCTTGAAATGGCATCCAAA
GGTGATAGCACACAAGCTGACAAGCTGGTCCGTGATATTTATGGAGGAGATTATGAAAGATTTGGTTTGCCAGGTTGGGC
TGTAGCATCTAGTTTTGGGAATATGATTTATAAGGAGAAGCGAGAATCTGTTAGTAAAGAAGATCTGGCAAGAGCTACTT
TAGTTACTATCACCAATAACATTGGTTCTGTGGCACGAATGTGTGCTGTTAATGAGAAAATAAACAGAGTTGTCTTTGTT
GGAAACTTTTTACGTGTCAATACCCTCTCAATGAAACTTTTGGCATATGCACTGGATTACTGGTCAAAAGGTCAACTAAA
AGCATTGTTTCTAGAACATGAGGGTTACTTTGGAGCAGTTGGTGCACTTCTTGGGCTGCCAAATTTCAGCTAA

Library Parental gene expression (RPM)
bodymap2_liver 126 .13 RPM
bodymap2_lung 78 .90 RPM
bodymap2_breast 88 .02 RPM
bodymap2_adipose 71 .50 RPM
bodymap2_adrenal 80 .83 RPM
bodymap2_skeletal_muscle 32 .27 RPM
bodymap2_thyroid 76 .34 RPM
bodymap2_prostate 70 .32 RPM
bodymap2_colon 75 .39 RPM
bodymap2_testis 102 .37 RPM
bodymap2_brain 89 .73 RPM
bodymap2_heart 57 .34 RPM
bodymap2_white_blood_cells 110 .21 RPM
bodymap2_lymph_node 64 .89 RPM
bodymap2_ovary 119 .25 RPM
bodymap2_kidney 105 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000011633 ortholog_one2one 4 retrogenes
retro_chof_1188, retro_chof_1391, retro_chof_1837, retro_chof_830,
Callithrix jacchus ENSCJAG00000015550 ortholog_one2many 1 retrogene
retro_cjac_2037,
Gorilla gorilla ENSGGOG00000004947 ortholog_one2one 1 retrogene
retro_ggor_646,
Nomascus leucogenys ENSNLEG00000004896 ortholog_one2one 5 retrogenes
retro_nleu_1430, retro_nleu_144, retro_nleu_2975, retro_nleu_3058, retro_nleu_3099,
Pongo abelii ENSPPYG00000016024 ortholog_one2one 1 retrogene
retro_pabe_2848,
Pan troglodytes ENSPTRG00000017509 ortholog_one2one 1 retrogene
retro_ptro_608,
Tursiops truncatus ENSTTRG00000016157 ortholog_one2many 3 retrogenes
retro_ttru_1947, retro_ttru_29, retro_ttru_994,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_779 90.11 100.00
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Download FASTA sequences of all ENSG00000120137 retrocopies