Parental gene: | SH3GL1, ENSG00000141985 |
| Aliases: | SH3GL1, CNSA1, EEN, SH3D2B, SH3P8 |
| Description: | SH3-domain GRB2-like 1 [Source:HGNC Symbol;Acc:10830] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 19:4360366..4400544(-) |
>ENSG00000141985
ATGTCGGTGGCGGGGCTGAAGAAGCAGTTCTACAAGGCGAGCCAGCTGGTCAGTGAGAAGGTCGGAGGGGCCGAGGGGAC
CAAGCTGGATGATGACTTCAAAGAGATGGAGAAGAAGGTGGATGTCACCAGCAAGGCGGTGACAGAAGTGCTGGCCAGGA
CCATCGAGTACCTGCAGCCCAACCCAGCCTCGCGGGCTAAGCTGACCATGCTCAACACGGTGTCCAAGATCCGGGGCCAG
GTGAAGAACCCCGGCTACCCGCAGTCGGAGGGGCTTCTGGGCGAGTGCATGATCCGCCACGGGAAGGAGCTGGGCGGCGA
GTCCAACTTTGGTGACGCATTGCTGGATGCCGGCGAGTCCATGAAGCGCCTGGCAGAGGTGAAGGACTCCCTGGACATCG
AGGTCAAGCAGAACTTCATTGACCCCCTCCAGAACCTGTGCGAGAAAGACCTGAAGGAGATCCAGCACCACCTGAAGAAA
CTGGAGGGCCGCCGCCTGGACTTTGACTACAAGAAGAAGCGGCAGGGCAAGATCCCCGATGAGGAGCTACGCCAGGCGCT
GGAGAAGTTCGAGGAGTCCAAGGAGGTGGCAGAAACCAGCATGCACAACCTCCTGGAGACTGACATCGAGCAGGTGAGTC
AGCTCTCGGCCCTGGTGGATGCACAGCTGGACTACCACCGGCAGGCCGTGCAGATCCTGGACGAGCTGGCGGAGAAGCTC
AAGCGCAGGATGCGGGAAGCTTCCTCACGCCCTAAGCGGGAGTATAAGCCCAAGCCCCGGGAGCCCTTTGACCTTGGAGA
GCCTGAGCAGTCCAACGGGGGCTTCCCCTGCACCACAGCCCCCAAGATCGCAGCTTCATCGTCTTTCCGATCTTCCGACA
AGCCCATCCGGACCCCTAGCCGGAGCATGCCGCCCCTGGACCAGCCGAGCTGCAAGGCGCTGTACGACTTCGAGCCCGAG
AACGACGGGGAGCTGGGCTTCCATGAGGGCGACGTCATCACGCTGACCAACCAGATCGATGAGAACTGGTACGAGGGCAT
GCTGGACGGCCAGTCGGGCTTCTTCCCGCTCAGCTACGTGGAGGTGCTTGTGCCCCTGCCGCAGTGA
ATGTCGGTGGCGGGGCTGAAGAAGCAGTTCTACAAGGCGAGCCAGCTGGTCAGTGAGAAGGTCGGAGGGGCCGAGGGGAC
CAAGCTGGATGATGACTTCAAAGAGATGGAGAAGAAGGTGGATGTCACCAGCAAGGCGGTGACAGAAGTGCTGGCCAGGA
CCATCGAGTACCTGCAGCCCAACCCAGCCTCGCGGGCTAAGCTGACCATGCTCAACACGGTGTCCAAGATCCGGGGCCAG
GTGAAGAACCCCGGCTACCCGCAGTCGGAGGGGCTTCTGGGCGAGTGCATGATCCGCCACGGGAAGGAGCTGGGCGGCGA
GTCCAACTTTGGTGACGCATTGCTGGATGCCGGCGAGTCCATGAAGCGCCTGGCAGAGGTGAAGGACTCCCTGGACATCG
AGGTCAAGCAGAACTTCATTGACCCCCTCCAGAACCTGTGCGAGAAAGACCTGAAGGAGATCCAGCACCACCTGAAGAAA
CTGGAGGGCCGCCGCCTGGACTTTGACTACAAGAAGAAGCGGCAGGGCAAGATCCCCGATGAGGAGCTACGCCAGGCGCT
GGAGAAGTTCGAGGAGTCCAAGGAGGTGGCAGAAACCAGCATGCACAACCTCCTGGAGACTGACATCGAGCAGGTGAGTC
AGCTCTCGGCCCTGGTGGATGCACAGCTGGACTACCACCGGCAGGCCGTGCAGATCCTGGACGAGCTGGCGGAGAAGCTC
AAGCGCAGGATGCGGGAAGCTTCCTCACGCCCTAAGCGGGAGTATAAGCCCAAGCCCCGGGAGCCCTTTGACCTTGGAGA
GCCTGAGCAGTCCAACGGGGGCTTCCCCTGCACCACAGCCCCCAAGATCGCAGCTTCATCGTCTTTCCGATCTTCCGACA
AGCCCATCCGGACCCCTAGCCGGAGCATGCCGCCCCTGGACCAGCCGAGCTGCAAGGCGCTGTACGACTTCGAGCCCGAG
AACGACGGGGAGCTGGGCTTCCATGAGGGCGACGTCATCACGCTGACCAACCAGATCGATGAGAACTGGTACGAGGGCAT
GCTGGACGGCCAGTCGGGCTTCTTCCCGCTCAGCTACGTGGAGGTGCTTGTGCCCCTGCCGCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 12 .63 RPM |
| bodymap2_lung | 33 .98 RPM |
| bodymap2_breast | 32 .30 RPM |
| bodymap2_adipose | 61 .30 RPM |
| bodymap2_adrenal | 44 .54 RPM |
| bodymap2_skeletal_muscle | 12 .70 RPM |
| bodymap2_thyroid | 31 .96 RPM |
| bodymap2_prostate | 36 .20 RPM |
| bodymap2_colon | 39 .72 RPM |
| bodymap2_testis | 41 .36 RPM |
| bodymap2_brain | 14 .81 RPM |
| bodymap2_heart | 7 .38 RPM |
| bodymap2_white_blood_cells | 20 .04 RPM |
| bodymap2_lymph_node | 28 .95 RPM |
| bodymap2_ovary | 59 .89 RPM |
| bodymap2_kidney | 19 .61 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gorilla gorilla | ENSGGOG00000008198 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000000273 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000000931 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003122 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000009405 | ortholog_one2one | 6 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_1742 | 84.04 | 90.22 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_1745 | 84.94 | 90.22 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_1859 | 85.33 | 99.73 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000141985 retrocopies