Parental gene:

SH3GL1, ENSMMUG00000000273

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:19:4220307..4223736(-)


>ENSMMUG00000000273
ATGCGGGAAGCTTCGTCACGCCCCAGGCGGGAGTATAAGCCCAAGCCCCGGGAGCCCTTTGACCTCGGAGAGCCTGAGCA
GTCCAACGGGGGCTTCCCCTGCACCACAGCCCCCAAGATCGCAGCTTCGTCGTCTTTCCGATCTTCCGACAAGCCCATCC
GAACCCCTAGCCGGAGCATGCTGCCCCTGGACCAGCCAAGCTGCAAGGCGCTGTACGACTTCGAGCCGGAGAATGACGGG
GAGCTGGGCTTCCGTGAGGGCGACGTCATCACACTGACCAACCAGATTGACGAGAACTGGTACGAGGGCATGCTGGACGG
CCAGTCGGGCTTCTTTCCGCTCAGCTATGTGGAGGTGCTTGTGCCCCTGCCGCAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 44 .74 RPM
SRP007412_brain 12 .66 RPM
SRP007412_cerebellum 10 .72 RPM
SRP007412_heart 10 .01 RPM
SRP007412_kidney 22 .07 RPM
SRP007412_liver 34 .16 RPM
SRP007412_testis 44 .06 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010823 possible_ortholog 1 retrogene
retro_amel_1668,
Choloepus hoffmanni ENSCHOG00000001689 possible_ortholog 2 retrogenes
retro_chof_1007, retro_chof_24,
Cavia porcellus ENSCPOG00000003970 possible_ortholog 1 retrogene
retro_cpor_1384,
Homo sapiens ENSG00000141985 possible_ortholog 3 retrogenes
retro_hsap_1742, retro_hsap_1745, retro_hsap_1859,
Gorilla gorilla ENSGGOG00000008198 possible_ortholog 3 retrogenes
retro_ggor_2151, retro_ggor_2258, retro_ggor_675,
Macropus eugenii ENSMEUG00000015197 possible_ortholog 1 retrogene
retro_meug_523,
Macaca mulatta ENSMMUG00000013669 within_species_paralog 1 retrogene
retro_mmul_1265,
Monodelphis domestica ENSMODG00000000931 possible_ortholog 1 retrogene
retro_mdom_1530,
Nomascus leucogenys ENSNLEG00000003122 possible_ortholog 2 retrogenes
retro_nleu_2914, retro_nleu_3075,
Pongo abelii ENSPPYG00000009405 possible_ortholog 6 retrogenes
retro_pabe_1488, retro_pabe_1516, retro_pabe_1530, retro_pabe_1542, retro_pabe_1700, retro_pabe_3542,
Pan troglodytes ENSPTRG00000020792 possible_ortholog 1 retrogene
retro_ptro_576,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1264 79.37 100.00
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Download FASTA sequences of all ENSMMUG00000000273 retrocopies