Parental gene: | SH3GL1, ENSGGOG00000008198 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 19:4464074..4504112(-) |
>ENSGGOG00000008198
ATGTCGGTGGCGGGGCTGAAGAAGCAGTTCTACAAGGCGAGCCAGCTGGTCAGTGAGAAGGTTGGAGGGGCCGAGGGGAC
CAAGCTGGATGATGACTTCAAAGAGATGGAGAAGAAGGTGGATGTCACCAGCAAGGCGGTGACAGAAGTGCTGGCCAGGA
CCATCGAGTACCTGCAGCCCAACCCAGCCTCGCGGGCTAAGCTGACCATGCTCAACACGGTGTCCAAGATCCGGGGCCAG
GTGAAGAACCCCGGCTACCCGCAGTCGGAGGGGCTCCTGGGCGAGTGCATGATCCGCCACGGGAAGGAGCTGGGCGGCGA
GTCCAACTTTGGTGACGCATTGCTGGATGCCGGCGAGTCCATGAAGCGCCTGGCAGAGGTGAAGGACTCCCTGGACATCG
AGGTCAAGCAGAACTTCATTGACCCCCTCCAGAACCTGTGCGAGAAAGACCTGAAGGAGATCCAGCACCACCTGAAGAAA
CTGGAGGGCCGCCGCCTGGACTTTGATTACAAGAAGAAGCGGCAGGGCAAGATCCCCGATGAGGAGCTACGCCAGGCGCT
CGAGAAGTTCGAGGAGTCCAAGGAGGTGGCAGAAACCAGCATGCACAACCTCCTGGAGACCGACATCGAGCAGGTGAGTC
AGCTCTCGGCCCTGGTGGACGCACAGCTGGACTACCACCGGCAGGCCGTGCAGATCCTGGACGAGCTGGCGGAGAAGCTC
AAGCGCAGGATGCGGGAAGCTTCCTCACGCCCTAAGCGGGAGTATAAGCCCAAGCCCCGGGAGCCCTTGGACCTTGGAGA
GCCTGAGCAGTCCAATGGGGGTTTCCCCTGCACCACAGCCCCCAAGATCGCAGCTTCATCGTCTTTCCGATCTTCCGACA
AGCCCATCCGGACCCCTAGCCGGAGCATGCCGCCCCTGGACCAGCCAAGCTGCAAGGCGCTGTACGACTTTGAGCCCGAG
AACGACGGGGAGCTGGGCTTCCGTGAGGGCGACGTCATCACGCTGACCAACCAGATCGATGAGAACTGGTACGAGGGCAT
GCTGGACGGCCAGTCGGGCTTCTTCCCGCTCAGCTACGTGGAGGTGCTTGTGCCCCTGCCGCAGTGA
ATGTCGGTGGCGGGGCTGAAGAAGCAGTTCTACAAGGCGAGCCAGCTGGTCAGTGAGAAGGTTGGAGGGGCCGAGGGGAC
CAAGCTGGATGATGACTTCAAAGAGATGGAGAAGAAGGTGGATGTCACCAGCAAGGCGGTGACAGAAGTGCTGGCCAGGA
CCATCGAGTACCTGCAGCCCAACCCAGCCTCGCGGGCTAAGCTGACCATGCTCAACACGGTGTCCAAGATCCGGGGCCAG
GTGAAGAACCCCGGCTACCCGCAGTCGGAGGGGCTCCTGGGCGAGTGCATGATCCGCCACGGGAAGGAGCTGGGCGGCGA
GTCCAACTTTGGTGACGCATTGCTGGATGCCGGCGAGTCCATGAAGCGCCTGGCAGAGGTGAAGGACTCCCTGGACATCG
AGGTCAAGCAGAACTTCATTGACCCCCTCCAGAACCTGTGCGAGAAAGACCTGAAGGAGATCCAGCACCACCTGAAGAAA
CTGGAGGGCCGCCGCCTGGACTTTGATTACAAGAAGAAGCGGCAGGGCAAGATCCCCGATGAGGAGCTACGCCAGGCGCT
CGAGAAGTTCGAGGAGTCCAAGGAGGTGGCAGAAACCAGCATGCACAACCTCCTGGAGACCGACATCGAGCAGGTGAGTC
AGCTCTCGGCCCTGGTGGACGCACAGCTGGACTACCACCGGCAGGCCGTGCAGATCCTGGACGAGCTGGCGGAGAAGCTC
AAGCGCAGGATGCGGGAAGCTTCCTCACGCCCTAAGCGGGAGTATAAGCCCAAGCCCCGGGAGCCCTTGGACCTTGGAGA
GCCTGAGCAGTCCAATGGGGGTTTCCCCTGCACCACAGCCCCCAAGATCGCAGCTTCATCGTCTTTCCGATCTTCCGACA
AGCCCATCCGGACCCCTAGCCGGAGCATGCCGCCCCTGGACCAGCCAAGCTGCAAGGCGCTGTACGACTTTGAGCCCGAG
AACGACGGGGAGCTGGGCTTCCGTGAGGGCGACGTCATCACGCTGACCAACCAGATCGATGAGAACTGGTACGAGGGCAT
GCTGGACGGCCAGTCGGGCTTCTTCCCGCTCAGCTACGTGGAGGTGCTTGTGCCCCTGCCGCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 31 .41 RPM |
| SRP007412_cerebellum | 36 .99 RPM |
| SRP007412_heart | 11 .54 RPM |
| SRP007412_kidney | 19 .63 RPM |
| SRP007412_liver | 19 .36 RPM |
| SRP007412_testis | 27 .76 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000141985 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000000273 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000000931 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003122 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000009405 | ortholog_one2one | 6 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_675 | 81.17 | 60.60 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_2151 | 80.90 | 77.99 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_2258 | 76.82 | 96.74 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000008198 retrocopies