Parental gene: | TWF1, ENSG00000151239 |
| Aliases: | TWF1, A6, PTK9 |
| Description: | twinfilin actin-binding protein 1 [Source:HGNC Symbol;Acc:9620] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 12:44187525..44200178(-) |
>ENSG00000151239
ATGTCCCACCAGACCGGCATCCAAGCAAGTGAAGATGTTAAAGAGATCTTTGCCAGAGCCAGAAATGGAAAGTACAGACT
TCTGAAAATATCTATTGAAAATGAGCAACTTGTGATTGGATCATATAGTCAGCCTTCAGATTCCTGGGATAAGGATTATG
ATTCCTTTGTTTTACCCCTGTTGGAGGACAAACAACCATGCTATATATTATTCAGGTTAGATTCTCAGAATGCCCAGGGA
TATGAATGGATATTCATTGCATGGTCTCCAGATCATTCTCATGTTCGTCAAAAAATGTTGTATGCAGCAACAAGAGCAAC
TCTGAAGAAGGAATTTGGAGGTGGCCACATTAAAGATGAAGTATTTGGAACAGTAAAGGAAGATGTATCATTACATGGAT
ATAAAAAATACTTGCTGTCACAATCTTCCCCTGCCCCACTGACTGCAGCTGAGGAAGAACTACGACAGATTAAAATCAAT
GAGAGCCCAGAGGATCATATTGGGGTACAGACTGACGTGGGTGTGGACACTAAGCATCAAACACTACAAGGAGTAGCATT
TCCCATTTCTCGAGAAGCCTTTCAGGCTTTGGAAAAATTGAATAATAGACAGCTCAACTATGTGCAGTTGGAAATAGATA
TAAAAAATGAAATTATAATTTTGGCCAACACAACAAATACAGAACTGAAAGATTTGCCAAAGAGGATTCCCAAGGATTCA
GCTCGTTACCATTTCTTTCTGTATAAACATTCCCATGAAGGAGACTATTTAGAGTCCATAGTTTTTATTTATTCAATGCC
TGGATACACATGCAGTATAAGAGAGCGGATGCTGTATTCTAGCTGCAAGAGCCGTCTGCTAGAAATTGTAGAAAGACAAC
TACAAATGGATGTAATTAGAAAGATCGAGATAGACAATGGGGATGAGTTGACTGCAGACTTCCTTTATGAAGAAGTACAT
CCCAAGCAGCATGCACACAAGCAAAGTTTTGCAAAACCAAAAGGTCCTGCAGGAAAAAGAGGAATTCGAAGACTAATTAG
GGGCCCAGCGGAAACTGAAGCTACTACTGATTAA
ATGTCCCACCAGACCGGCATCCAAGCAAGTGAAGATGTTAAAGAGATCTTTGCCAGAGCCAGAAATGGAAAGTACAGACT
TCTGAAAATATCTATTGAAAATGAGCAACTTGTGATTGGATCATATAGTCAGCCTTCAGATTCCTGGGATAAGGATTATG
ATTCCTTTGTTTTACCCCTGTTGGAGGACAAACAACCATGCTATATATTATTCAGGTTAGATTCTCAGAATGCCCAGGGA
TATGAATGGATATTCATTGCATGGTCTCCAGATCATTCTCATGTTCGTCAAAAAATGTTGTATGCAGCAACAAGAGCAAC
TCTGAAGAAGGAATTTGGAGGTGGCCACATTAAAGATGAAGTATTTGGAACAGTAAAGGAAGATGTATCATTACATGGAT
ATAAAAAATACTTGCTGTCACAATCTTCCCCTGCCCCACTGACTGCAGCTGAGGAAGAACTACGACAGATTAAAATCAAT
GAGAGCCCAGAGGATCATATTGGGGTACAGACTGACGTGGGTGTGGACACTAAGCATCAAACACTACAAGGAGTAGCATT
TCCCATTTCTCGAGAAGCCTTTCAGGCTTTGGAAAAATTGAATAATAGACAGCTCAACTATGTGCAGTTGGAAATAGATA
TAAAAAATGAAATTATAATTTTGGCCAACACAACAAATACAGAACTGAAAGATTTGCCAAAGAGGATTCCCAAGGATTCA
GCTCGTTACCATTTCTTTCTGTATAAACATTCCCATGAAGGAGACTATTTAGAGTCCATAGTTTTTATTTATTCAATGCC
TGGATACACATGCAGTATAAGAGAGCGGATGCTGTATTCTAGCTGCAAGAGCCGTCTGCTAGAAATTGTAGAAAGACAAC
TACAAATGGATGTAATTAGAAAGATCGAGATAGACAATGGGGATGAGTTGACTGCAGACTTCCTTTATGAAGAAGTACAT
CCCAAGCAGCATGCACACAAGCAAAGTTTTGCAAAACCAAAAGGTCCTGCAGGAAAAAGAGGAATTCGAAGACTAATTAG
GGGCCCAGCGGAAACTGAAGCTACTACTGATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 46 .18 RPM |
| bodymap2_lung | 46 .62 RPM |
| bodymap2_breast | 73 .37 RPM |
| bodymap2_adipose | 65 .34 RPM |
| bodymap2_adrenal | 63 .58 RPM |
| bodymap2_skeletal_muscle | 5 .73 RPM |
| bodymap2_thyroid | 77 .36 RPM |
| bodymap2_prostate | 84 .14 RPM |
| bodymap2_colon | 80 .59 RPM |
| bodymap2_testis | 71 .30 RPM |
| bodymap2_brain | 44 .28 RPM |
| bodymap2_heart | 14 .71 RPM |
| bodymap2_white_blood_cells | 19 .96 RPM |
| bodymap2_lymph_node | 51 .13 RPM |
| bodymap2_ovary | 84 .18 RPM |
| bodymap2_kidney | 93 .89 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017332 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000008386 | ortholog_one2one | 5 retrogenes | |
| Monodelphis domestica | ENSMODG00000018535 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000000364 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000022451 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017931 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000007525 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000004846 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000022507 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_1819 | 98.66 | 97.14 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_4916 | 89.20 | 70.86 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000151239 retrocopies