Parental gene:

TWF1, ENSPTRG00000004846

Aliases:TWF1, PTK9
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:12:45609744..45622382(+)


>ENSPTRG00000004846
ATGACGCGCCGGGGCCGGCGGAGGAGCAGCCACTTCCTGGAGCCGCCGGCCGGGGCCGCTGGCTGCACTCAGCGCCGGAG
CCGGGAGCTAGCGGCCGCCGCCATGTCCCACCAGACCGGCATCCAAGCAAGTGAAGATGTTAAAGAGATCTTTGCCAGAG
CCAGAAATGGAAAGTACAGACTTCTGAAAATATCTATTGAAAATGAGCAACTTGTGATTGGATCATATAGTCAGCCTTCA
GATTCCTGGGATAAGGATTATGATTCCTTTGTTTTACCCCTGTTGGAGGACAAACAACCATGCTATATATTATTCAGGTT
AGATTCTCAGAATGCCCAGGGATATGAATGGATATTCATTGCATGGTCTCCAGATCATTCTCATGTTCGTCAAAAAATGT
TGTATGCAGCAACAAGAGCAACTCTGAAGAAGGAATTTGGAGGTGGCCACATTAAAGATGAAGTATTTGGAACAGTAAAG
GAAGATGTATCATTACATGGATATAAAAAATACTTGCTGTCACAATCTTCCCCTGCCCCACTGACTGCAGCTGAGGAAGA
ATTACGACAGATTAAAATCAATGAGGTACAGACTGACGTGGGTGTGGACACTAAGCATCAAACACTACAAGGAGTAGCAT
TTCCCATTTCTCGAGAAGCCTTTCAGGCTTTGGAAAAATTGAATAACAGACAGCTCAACTATGTGCAGTTGGAAATAGAT
ATAAAAAATGAAATTATAATTTTGGCCAACACAACAAATACAGAACTGAAAGATTTGCCAAAGAGGATTCCCAAGGATTC
AGCTCGTTACCATTTCTTTCTGTATAAACATTCCCATGAAGGAGACTATTTAGAGTCCATAGTTTTTATTTATTCAATGC
CTGGATACACATGCAGTATAAGAGAGCGGATGCTGTATTCTAGCTGCAAGAGCCCTCTGCTAGAAATTGTAGAAAGACAA
CTACAAATGGATGTAATTAGAAAGATCGAGATAGACAATGGGGATGAGTTGACTGCAGACTTCCTTTATGAAGAAGTACA
TCCCAAGCAGCATGCACACAAGCAAAGTTTTGCAAAACCAAAAGGTCCTGCAGGAAAAAGAGGAATTCGAAGACTAATCA
GGGGCCCAGCGGAAACTGAAGCTACTACTGATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 15 .78 RPM
SRP007412_cerebellum 13 .01 RPM
SRP007412_heart 7 .37 RPM
SRP007412_kidney 36 .17 RPM
SRP007412_liver 22 .23 RPM
SRP007412_testis 14 .75 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017332 ortholog_one2one 1 retrogene
retro_amel_1224,
Choloepus hoffmanni ENSCHOG00000008386 ortholog_one2one 5 retrogenes
retro_chof_1525, retro_chof_2013, retro_chof_2569, retro_chof_391, retro_chof_509,
Homo sapiens ENSG00000151239 ortholog_one2one 2 retrogenes
retro_hsap_1819, retro_hsap_4916,
Monodelphis domestica ENSMODG00000018535 ortholog_one2many 1 retrogene
retro_mdom_167,
Mustela putorius furo ENSMPUG00000000364 ortholog_one2one 1 retrogene
retro_mputfur_1629,
Mus musculus ENSMUSG00000022451 ortholog_one2one 1 retrogene
retro_mmus_2961,
Nomascus leucogenys ENSNLEG00000017931 ortholog_one2one 1 retrogene
retro_nleu_2877,
Otolemur garnettii ENSOGAG00000007525 ortholog_one2one 1 retrogene
retro_ogar_1058,
Rattus norvegicus ENSRNOG00000022507 ortholog_one2one 1 retrogene
retro_rnor_2176,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_3279 89.60 64.58
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Download FASTA sequences of all ENSPTRG00000004846 retrocopies