Parental gene:

Twf1, ENSRNOG00000022507

Aliases:Twf1, Ptk9
Description:Twinfilin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q5RJR2]
Organism:Rat (Rattus norvegicus)
Coordinates:7:135495109..135507004(-)


>ENSRNOG00000022507
ATGTCCCACCAGACCGGCATCCAAGCAAGTGAAGACGTCAAAGAGATCTTTGCCAGAGCCAGAAATGGGAAATACCGACT
TCTAAAAATATCGATTGAAAATGAGCAACTGGTGGTCGGGTCCTGTAGTCCGCCTTCAGATTCCTGGGAACAGGATTACG
ATCCCTTTGTCTTGCCCCTGCTGGAGGACAAGCAACCGTGCTATGTGTTATTCAGGTTAGATTCTCAGAATGCCCAGGGA
TATGAGTGGATATTCATTGCATGGTCTCCAGATCATTCTCATGTTCGTCAAAAAATGCTGTATGCGGCAACAAGAGCAAC
TCTGAAAAAAGAATTTGGAGGTGGCCACATTAAAGATGAAGTGTTTGGAACAGTAAAGGAGGACGTATCACTACATGGAT
ATAGAAAGTATCTTCTCTCCCAGTCTTCTCCTGCCCCTCTGACTGCAGCAGAGGAAGAATTAAGGCAGATTAAAATCAGT
GAGGTACAAACTGACGTGAGTGTGGACACAAAGCATCAGACACTACAAGGAGTAGCATTTCCTATTTCTCGAGATGCCTT
CCAGGCTTTGGAAAAACTGAGTAAGAGACAGCTCAACTATGTGCAGTTGGAAATAGATATAAAAAATGAAACAATAATTT
TGGCCAACACAGAAAATACAGAACTAAAAGATTTGCCAAAGAGGATTCCCAAGGATTCAGCACGCTACCATTTCTTTCTG
TATAAGCATTCCCACGAAGGAGACTACTTAGAGTCCATAGTTTTTATTTATTCAATGCCCGGATACACATGCAGCATAAG
AGAGCGGATGCTGTATTCCAGCTGCAAGAGCCCTCTGTTAGATATTGTAGAAAGACAACTGCAGATGGATGTGATCAGAA
AGATTGAGATAGACAATGGGGATGAACTGACCGCAGATTTCCTGTACGATGAAGTCCATCCCAAGCAGCATGCACATAAG
CAGAGTTTTGCTAAACCAAAGGGTCCTGCGGGAAAGAGAGGGATTAGAAGATTGATTAGGGGTCCAGCGGAAGCAGAAGC
CACTACTGATTAA

Library Parental gene expression (RPM)
SRP017611_liver 20 .44 RPM
SRP017611_kidney 86 .04 RPM
SRP017611_brain 27 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017332 ortholog_one2one 1 retrogene
retro_amel_1224,
Choloepus hoffmanni ENSCHOG00000008386 ortholog_one2one 5 retrogenes
retro_chof_1525, retro_chof_2013, retro_chof_2569, retro_chof_391, retro_chof_509,
Homo sapiens ENSG00000151239 ortholog_one2one 2 retrogenes
retro_hsap_1819, retro_hsap_4916,
Monodelphis domestica ENSMODG00000018535 ortholog_one2many 1 retrogene
retro_mdom_167,
Mustela putorius furo ENSMPUG00000000364 ortholog_one2one 1 retrogene
retro_mputfur_1629,
Mus musculus ENSMUSG00000022451 ortholog_one2one 1 retrogene
retro_mmus_2961,
Nomascus leucogenys ENSNLEG00000017931 ortholog_one2one 1 retrogene
retro_nleu_2877,
Otolemur garnettii ENSOGAG00000007525 ortholog_one2one 1 retrogene
retro_ogar_1058,
Pan troglodytes ENSPTRG00000004846 ortholog_one2one 1 retrogene
retro_ptro_3279,
Rattus norvegicus ENSRNOG00000048915 within_species_paralog 2 retrogenes
retro_rnor_1740, retro_rnor_1908,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2176 98.51 76.57
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Download FASTA sequences of all ENSRNOG00000022507 retrocopies