Parental gene:

COX11, ENSG00000166260

Aliases:COX11, COX11P
Description:cytochrome c oxidase assembly homolog 11 (yeast) [Source:HGNC Symbol;Acc:2261]
Organism:Human (Homo sapiens)
Coordinates:17:53029262..53046146(-)


>ENSG00000166260
ATGGGAGGGCTCTGGCGTCCTGGATGGAGGTGCGTTCCTTTCTGTGGCTGGCGCTGGATCCACCCTGGGTCTCCAACCAG
GGCTGCAGAGAGGGTAGAGCCGTTTCTTAGGCCAGAGTGGAGTGGGACAGGAGGTGCCGAGAGAGGACTGAGGTGGCTTG
GGACATGGAAGCGCTGCAGCCTTCGAGCCCGGCATCCAGCATTGCAGCCGCCGCGGCGGCCTAAGAGCTCGAACCCTTTC
ACACGCGCGCAGGAGGAGGAGCGGCGGCGGCAGAACAAGACGACCCTCACTTACGTGGCCGCTGTCGCCGTGGGCATGCT
GGGGGCGTCCTACGCTGCCGTACCCCTTTATCGGCTCTATTGCCAGACTACTGGACTTGGAGGATCAGCAGTTGCAGGTC
ATGCCTCAGACAAGATTGAAAACATGGTGCCTGTTAAAGATCGAATCATTAAAATTAGCTTTAATGCAGATGTGCATGCA
AGTCTCCAGTGGAACTTTAGACCTCAGCAAACAGAAATATATGTGGTGCCAGGAGAGACTGCACTGGCGTTTTACAGAGC
TAAGAATCCTACTGACAAACCAGTAATTGGAATTTCTACATACAATATTGTTCCATTTGAAGCTGGACAGTATTTCAATA
AAATACAGTGCTTCTGTTTTGAAGAACAAAGGCTTAATCCCCAAGAGGAAGTAGATATGCCAGTGTTTTTCTACATTGAT
CCTGAATTTGCTGAAGATCCAAGAATGATTAAAGTTGATCTTATCACTCTTTCTTACACTTTTTTTGAAGCAAAGGAAGG
GCACAAGTTGCCAGTTCCAGGATATAATTGA

Library Parental gene expression (RPM)
bodymap2_liver 33 .06 RPM
bodymap2_lung 28 .34 RPM
bodymap2_breast 30 .76 RPM
bodymap2_adipose 29 .30 RPM
bodymap2_adrenal 39 .96 RPM
bodymap2_skeletal_muscle 30 .59 RPM
bodymap2_thyroid 46 .97 RPM
bodymap2_prostate 47 .70 RPM
bodymap2_colon 39 .33 RPM
bodymap2_testis 32 .28 RPM
bodymap2_brain 47 .72 RPM
bodymap2_heart 31 .48 RPM
bodymap2_white_blood_cells 20 .24 RPM
bodymap2_lymph_node 32 .47 RPM
bodymap2_ovary 35 .10 RPM
bodymap2_kidney 58 .61 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000008482 ortholog_one2one 1 retrogene
retro_cpor_1340,
Dasypus novemcinctus ENSDNOG00000014862 ortholog_one2one 1 retrogene
retro_dnov_1933,
Dipodomys ordii ENSDORG00000001207 ortholog_one2one 1 retrogene
retro_dord_180,
Microcebus murinus ENSMICG00000005225 ortholog_one2one 1 retrogene
retro_mmur_1119,
Monodelphis domestica ENSMODG00000014855 ortholog_one2one 1 retrogene
retro_mdom_952,
Mus musculus ENSMUSG00000020544 ortholog_one2one 4 retrogenes
retro_mmus_1318, retro_mmus_2318, retro_mmus_2714, retro_mmus_986,
Nomascus leucogenys ENSNLEG00000007990 ortholog_one2one 1 retrogene
retro_nleu_2297,
Ochotona princeps ENSOPRG00000004138 ortholog_one2one 1 retrogene
retro_opri_441,
Pongo abelii ENSPPYG00000008259 ortholog_one2many 2 retrogenes
retro_pabe_156, retro_pabe_2847,
Pan troglodytes ENSPTRG00000009422 ortholog_one2one 1 retrogene
retro_ptro_2335,
Rattus norvegicus ENSRNOG00000046318 ortholog_one2many 1 retrogene
retro_rnor_1515,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3442 88.13 100.00
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Download FASTA sequences of all ENSG00000166260 retrocopies