Parental gene:

ENSPPYG00000008259

Aliases:None
Description:Cytochrome c oxidase assembly protein COX11, mitochondrial [Source:UniProtKB/TrEMBL;Acc:H2NTL1]
Organism:Orangutan (Pongo abelii)
Coordinates:17:37297231..37308885(+)


>ENSPPYG00000008259
ATGGGAGGACTCTGGCGTCCGGGATGGAGGCGCGTAGCTTTCTGTGGCTGGCGCTGGATCCACCCTGGGTCTCCAACCAG
GGCTGCAGAGAGGGTAGAGCCGTTTCTTAGGCCAGAGTGCAGTGGGACAGGAGGTGCCGGGAGAGGACTGAGGTGGCTTG
GGACATGGAAGCGCTGCAGCCTTGGAGCCCGGCATCCAGCATTGCAGCCGCCGCGGCGGCATAAGAACTCGAACCCTTTC
ACGCGCGCGCAGAAGGAGGAGTGGCGGCGGCGGAACAAGACGACCCTCACTTACGTGGCCGCTGTCGCCGTGGGCATGCT
TGGGGCGTCCTACGCTGCCGTACCCCTTTATCGGCTGTATTGCCAGACTACTGGACTTGGAGGATCAGCAGTTGCAGGTC
ATGCCTCAGACAAGATTGAAAACATGGTGCCTGTTAAAGATCGAATCATTAAAATTAGCTTTAATGCAGATGTGCATGCA
AGTCTCCAGTGGAACTTTAGACCTCAGCAAACAGAAATATATGTGGTGCCAGGAGAGACTGCACTGGCGTTTTACAGAGC
TAAGAATCCTACTGACAAACCAGTAATTGGAATTTCTACATACAATATTGTTCCATTTGAAGCTGGACAGTATTTCAATA
AAATACAGTGCTTCTGTTTTGAAGAACAAAGGCTTAATCCCCAAGAGGAAGTAGATATGCCAGTGTTTTTCTACATTGAT
CCTGAATTTGCTGAAGATCCAAGAATGATTAAAGTTGATCTTATCACTCTTTCTTACACTTTTTTTGAAGCAAAGGAAGG
GCACAAGTTGCCAGTTCCAGGATATAATTCAAGTCAGCAACTAAGTCTTCCTTCAAAATTGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 5 .81 RPM
SRP007412_cerebellum 8 .63 RPM
SRP007412_heart 6 .05 RPM
SRP007412_kidney 20 .12 RPM
SRP007412_liver 12 .42 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000008482 ortholog_one2many 1 retrogene
retro_cpor_1340,
Dasypus novemcinctus ENSDNOG00000014862 ortholog_one2many 1 retrogene
retro_dnov_1933,
Dipodomys ordii ENSDORG00000001207 ortholog_one2many 1 retrogene
retro_dord_180,
Homo sapiens ENSG00000166260 ortholog_one2many 1 retrogene
retro_hsap_3442,
Microcebus murinus ENSMICG00000005225 ortholog_one2many 1 retrogene
retro_mmur_1119,
Monodelphis domestica ENSMODG00000014855 ortholog_one2many 1 retrogene
retro_mdom_952,
Mus musculus ENSMUSG00000020544 ortholog_one2many 4 retrogenes
retro_mmus_1318, retro_mmus_2318, retro_mmus_2714, retro_mmus_986,
Nomascus leucogenys ENSNLEG00000007990 ortholog_one2many 1 retrogene
retro_nleu_2297,
Ochotona princeps ENSOPRG00000004138 ortholog_one2many 1 retrogene
retro_opri_441,
Pan troglodytes ENSPTRG00000009422 ortholog_one2many 1 retrogene
retro_ptro_2335,
Rattus norvegicus ENSRNOG00000046318 ortholog_many2many 1 retrogene
retro_rnor_1515,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_156 98.55 96.17
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2. retro_pabe_2847 88.85 100.00
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Download FASTA sequences of all ENSPPYG00000008259 retrocopies