Parental gene: | Cox11, ENSMUSG00000020544 |
| Aliases: | None |
| Description: | cytochrome c oxidase assembly protein 11 [Source:MGI Symbol;Acc:MGI:1917052] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 11:90638172..90644931(+) |
>ENSMUSG00000020544
ATGGGAGGGCTCTGGTGTCCGGGATGGAGGTTGGTGGCTTCGTGTGGCCGGGGCTGGAGGCAGCCCGGGTGGTCAGGGCG
GACTGTGGTGAACGCAGAGCTGGTGCTTAGGCCCGGGTGGGATGGGCTCGGAGGCGCGGAGCGGGGTCTGAGACGCCTCG
GGACATGGAAGCGCCCGTGCGGGGTCCGGGGGCCCGCGACGCAGCCGCCACGGCGGCCGAGGAGCAGCAACCCTTTCCAG
CGCGCGCAGGAGGACGAGTGGCGGCGGCGGAACAAGACGGTGCTCACCTACGTGGCCGCGGCCGCCGTGGGCATGCTGGG
GGCCTCCTACGCCGCGGTGCCCCTCTATCGGCTCTACTGCCAGACTACTGGACTTGGAGGATCAGCAGTGGCCGGGCACT
CCTCAGACCAGATCGAGAACATGGTGCCTGTCAAGGACCGGGTCATTAAGGTCACCTTCAATGCTGACGTTCATGCCAGT
CTCCAGTGGAACTTCAGACCTCAGCAAACAGAGATCTATGTGGTACCAGGAGAGACTGCACTGGCATTTTATAAAGCTAA
GAATCCTACTGACAAACCAGTAATTGGAATTTCTACATATAATGTTGTACCGTTTGAAGCTGGACAGTATTTCAATAAGA
TACAGTGCTTCTGTTTTGAAGAACAAAGGCTTAATCCACAAGAAGAAGTAGATATGCCAGTGTTTTTCTACATTGATCCT
GAATTTGCAGAAGATCCAAGAATGGTGAATGTCGACCTCATCACTCTTTCTTACACTTTTTTTGAAGCAAAGGAAGGGCA
CAAGTTGCCAGTTCCAGGCTATAATTGA
ATGGGAGGGCTCTGGTGTCCGGGATGGAGGTTGGTGGCTTCGTGTGGCCGGGGCTGGAGGCAGCCCGGGTGGTCAGGGCG
GACTGTGGTGAACGCAGAGCTGGTGCTTAGGCCCGGGTGGGATGGGCTCGGAGGCGCGGAGCGGGGTCTGAGACGCCTCG
GGACATGGAAGCGCCCGTGCGGGGTCCGGGGGCCCGCGACGCAGCCGCCACGGCGGCCGAGGAGCAGCAACCCTTTCCAG
CGCGCGCAGGAGGACGAGTGGCGGCGGCGGAACAAGACGGTGCTCACCTACGTGGCCGCGGCCGCCGTGGGCATGCTGGG
GGCCTCCTACGCCGCGGTGCCCCTCTATCGGCTCTACTGCCAGACTACTGGACTTGGAGGATCAGCAGTGGCCGGGCACT
CCTCAGACCAGATCGAGAACATGGTGCCTGTCAAGGACCGGGTCATTAAGGTCACCTTCAATGCTGACGTTCATGCCAGT
CTCCAGTGGAACTTCAGACCTCAGCAAACAGAGATCTATGTGGTACCAGGAGAGACTGCACTGGCATTTTATAAAGCTAA
GAATCCTACTGACAAACCAGTAATTGGAATTTCTACATATAATGTTGTACCGTTTGAAGCTGGACAGTATTTCAATAAGA
TACAGTGCTTCTGTTTTGAAGAACAAAGGCTTAATCCACAAGAAGAAGTAGATATGCCAGTGTTTTTCTACATTGATCCT
GAATTTGCAGAAGATCCAAGAATGGTGAATGTCGACCTCATCACTCTTTCTTACACTTTTTTTGAAGCAAAGGAAGGGCA
CAAGTTGCCAGTTCCAGGCTATAATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 2 .85 RPM |
| SRP007412_cerebellum | 3 .52 RPM |
| SRP007412_heart | 6 .79 RPM |
| SRP007412_kidney | 5 .06 RPM |
| SRP007412_liver | 3 .14 RPM |
| SRP007412_testis | 4 .76 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000008482 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000014862 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000001207 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000166260 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000005225 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000014855 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000007990 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000004138 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000008259 | ortholog_one2many | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000009422 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000046318 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_986 | 73.41 | 93.82 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_1318 | 81.77 | 69.45 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_2318 | 79.72 | 75.64 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmus_2714 | 73.24 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000020544 retrocopies