Parental gene:

COX11, ENSPTRG00000009422

Aliases:None
Description:COX11 cytochrome c oxidase assembly homolog [Source:UniProtKB/TrEMBL;Acc:K7DPG0]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:17:53621472..53628986(-)


>ENSPTRG00000009422
ATGGGAGGGCTCTGGCGTCCTGCATGGAGGGGCGTCGCTTTCTGTGGCTGGCGCTGGATCCACCCTGGGTCTCCAACCAG
GGCTGCAGAGAGGGTAGAGCCGTTTCTTAGGCCAGAGTGGAGTGGGACAGGAGGTGCCGAGAGAGGACTGAGGTGGCTTG
GGACATGGAAGCGCTGCAGCCTTCCCTTCCGGCATCCAGCATTGCAGCCGCCGCGGCGGCCTAAGAGCTCGAACCCTTTC
ACGCGCGCGCAGGAGGAGAAGCGGCGGCGGCAGAACAAGACGACCCTCACTTACGTGGCCGCTGTCGCCGTGGGCATGCT
GGGGGCGTCCTACGCTGCCGTACCCCTTTATCGCCTCTATTGCCAGACTACTGGACTTGGAGGATCAGCAGTTGCAGGTC
ATGCCTCAGACAAGATTGAAAACATGGTGCCTGTTAAAGATCGAATCATTAAAATTAGCTTTAATGCAGATGTGCATGCA
AGTCTCCAGTGGAACTTTAGACCTCAGCAAACAGAAATATATGTGGTGCCAGGAGAGACTGCACTGGCGTTTTACAGAGC
TAAGAATCCTACTGACAAACCAGTAATTGGAATTTCTACATACAATATTGTTCCATTTGAAGCTGGACAGTATTTCAATA
AAATACAGTGCTTCTGTTTTGAAGAACAAAGGCTTAATCCCCAAGAGGAAGTAGATATGCCAGTGTTTTTCTACATTGAT
CCTGAATTTGCTGAAGATCCAAGAATGATTAAAGTTGATCTTATAACTCTTTCTTACACTTTTTTTGAAGCAAAGGAAGG
GCACAAGTTGCCAGTTCCAGGATATAATTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 19 .05 RPM
SRP007412_cerebellum 10 .36 RPM
SRP007412_heart 16 .67 RPM
SRP007412_kidney 24 .82 RPM
SRP007412_liver 9 .79 RPM
SRP007412_testis 12 .54 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000008482 ortholog_one2one 1 retrogene
retro_cpor_1340,
Dasypus novemcinctus ENSDNOG00000014862 ortholog_one2one 1 retrogene
retro_dnov_1933,
Dipodomys ordii ENSDORG00000001207 ortholog_one2one 1 retrogene
retro_dord_180,
Homo sapiens ENSG00000166260 ortholog_one2one 1 retrogene
retro_hsap_3442,
Microcebus murinus ENSMICG00000005225 ortholog_one2one 1 retrogene
retro_mmur_1119,
Monodelphis domestica ENSMODG00000014855 ortholog_one2one 1 retrogene
retro_mdom_952,
Mus musculus ENSMUSG00000020544 ortholog_one2one 4 retrogenes
retro_mmus_1318, retro_mmus_2318, retro_mmus_2714, retro_mmus_986,
Nomascus leucogenys ENSNLEG00000007990 ortholog_one2one 1 retrogene
retro_nleu_2297,
Ochotona princeps ENSOPRG00000004138 ortholog_one2one 1 retrogene
retro_opri_441,
Pongo abelii ENSPPYG00000008259 ortholog_one2many 2 retrogenes
retro_pabe_156, retro_pabe_2847,
Rattus norvegicus ENSRNOG00000046318 ortholog_one2many 1 retrogene
retro_rnor_1515,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2335 88.85 100.00
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Download FASTA sequences of all ENSPTRG00000009422 retrocopies