Parental gene:

Cox11, ENSRNOG00000046318

Aliases:None
Description:Protein Cox11; RCG35252 [Source:UniProtKB/TrEMBL;Acc:D3ZNJ0]
Organism:Rat (Rattus norvegicus)
Coordinates:10:78023827..78028723(+)


>ENSRNOG00000046318
ATGGGAGGGCTCTGGTGTCCGGGATGGAGGTTCATCACTTTGTGTGGCCGGGGCTGGAGCCAGCCCCGGTGGTCGGGCCG
GACGGTGGTGAACGCAGAGCGGGCTCTTAGGCCGGGATGGAATGGGGTCGGAGGCGCGGAGCAGGGACTGAGACGCCTCG
GGACATGGAAGCGCCCGAGCGGGGCCCGGGGTCCCGTCGCGCAGCCGCCACGGCGGCCGAAGAGCAGCAACCCTTTCCAG
CGGGCGCAGGAAGACGAGTGGCGGCGGCGGAACAAGACGGTGCTCACGTACGTGGCCGCGGCCGCCGTGGGCATGCTGGG
GGCCTCGTACGCCGCGGTGCCCCTCTATCGGCTCTACTGCCAGACTACTGGACTTGGAGGATCAGCAGTGGCTGGGCATG
CCTCAGACCAGATTGAAAACATGGTGCCTGTTAAGGACCGGATCATTAAGGTCACCTTCAATGCTGACGTTCACGCCAGT
CTCCAGTGGAACTTCAGACCTCAGCAAACAGAGATCTATGTGGTACCAGGAGAGACTGCACTGGCATTTTATAAAGCTAA
GAATCCTACTGACAAACCAGTAATTGGAATTTCTACATATAATGTTGTACCGTTTGAAGCCGGACAATATTTCAATAAAA
TACAGTGCTTCTGTTTTGAAGAACAAAGGCTTAATCCACAAGAAGAAGTAGATATGCCAGTGTTTTTCTACATTGATCCT
GAATTTGCAGAAGATCCAAGAATGGTGAATGTCGACCTCATCACTCTTTCTTACACTTTTTTTGAAGCGAAGGAAGGGCA
CAAGTTGGCAGTTCCAGGCTACAATTGA

Library Parental gene expression (RPM)
SRP017611_liver 2 .35 RPM
SRP017611_kidney 2 .79 RPM
SRP017611_brain 4 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000008482 ortholog_one2many 1 retrogene
retro_cpor_1340,
Dasypus novemcinctus ENSDNOG00000014862 ortholog_one2many 1 retrogene
retro_dnov_1933,
Dipodomys ordii ENSDORG00000001207 ortholog_one2many 1 retrogene
retro_dord_180,
Homo sapiens ENSG00000166260 ortholog_one2many 1 retrogene
retro_hsap_3442,
Microcebus murinus ENSMICG00000005225 ortholog_one2many 1 retrogene
retro_mmur_1119,
Monodelphis domestica ENSMODG00000014855 ortholog_one2many 1 retrogene
retro_mdom_952,
Mus musculus ENSMUSG00000020544 ortholog_one2many 4 retrogenes
retro_mmus_1318, retro_mmus_2318, retro_mmus_2714, retro_mmus_986,
Nomascus leucogenys ENSNLEG00000007990 ortholog_one2many 1 retrogene
retro_nleu_2297,
Ochotona princeps ENSOPRG00000004138 ortholog_one2many 1 retrogene
retro_opri_441,
Pongo abelii ENSPPYG00000008259 ortholog_many2many 2 retrogenes
retro_pabe_156, retro_pabe_2847,
Pan troglodytes ENSPTRG00000009422 ortholog_one2many 1 retrogene
retro_ptro_2335,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1515 79.74 55.27
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Download FASTA sequences of all ENSRNOG00000046318 retrocopies