Parental gene: | PRELID1, ENSG00000169230 |
| Aliases: | PRELID1, PRELI, PX19, SBBI12 |
| Description: | PRELI domain containing 1 [Source:HGNC Symbol;Acc:30255] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 5:176730774..176733960(+) |
>ENSG00000169230
ATGGTGAAGTATTTCCTGGGCCAGAGCGTGCTCCGGAGTTCCTGGGACCAAGTGTTCGCCGCCTTCTGGCAGCGGTACCC
GAATCCCTATAGCAAACATGTCTTGACGGAAGACATAGTACACCGGGAGGTGACCCCTGACCAGAAACTGCTGTCCCGGC
GACTCCTGACCAAGACCAACAGGATGCCACGCTGGGCCGAGCGACTATTTCCTGCCAATGTTGCTCACTCGGTGTACGTC
CTGGAGGACTCTATTGTGGACCCACAGAATCAGACCATGACTACCTTCACCTGGAACATCAACCACGCCCGGCTGATGGT
GGTGGAGGAACGATGTGTTTACTGTGTGAACTCTGACAACAGTGGCTGGACTGAAATCCGCCGGGAAGCCTGGGTCTCCT
CTAGCTTATTTGGTGTCTCCAGAGCTGTCCAGGAATTTGGTCTTGCCCGATTCAAAAGCAACGTGACCAAGACTATGAAG
GGTTTTGAATATATCTTGGCTAAGCTGCAAGGCGAGGCCCCTTCCAAAACACTTGTTGAGACAGCCAAGGAAGCCAAGGA
GAAGGCAAAGGAGACGGCACTGGCAGCTACAGAGAAGGCCAAGGACCTCGCCAGCAAGGCGGCCACCAAGAAGCAGCAGC
AGCAGCAACAGTTTGTGTAG
ATGGTGAAGTATTTCCTGGGCCAGAGCGTGCTCCGGAGTTCCTGGGACCAAGTGTTCGCCGCCTTCTGGCAGCGGTACCC
GAATCCCTATAGCAAACATGTCTTGACGGAAGACATAGTACACCGGGAGGTGACCCCTGACCAGAAACTGCTGTCCCGGC
GACTCCTGACCAAGACCAACAGGATGCCACGCTGGGCCGAGCGACTATTTCCTGCCAATGTTGCTCACTCGGTGTACGTC
CTGGAGGACTCTATTGTGGACCCACAGAATCAGACCATGACTACCTTCACCTGGAACATCAACCACGCCCGGCTGATGGT
GGTGGAGGAACGATGTGTTTACTGTGTGAACTCTGACAACAGTGGCTGGACTGAAATCCGCCGGGAAGCCTGGGTCTCCT
CTAGCTTATTTGGTGTCTCCAGAGCTGTCCAGGAATTTGGTCTTGCCCGATTCAAAAGCAACGTGACCAAGACTATGAAG
GGTTTTGAATATATCTTGGCTAAGCTGCAAGGCGAGGCCCCTTCCAAAACACTTGTTGAGACAGCCAAGGAAGCCAAGGA
GAAGGCAAAGGAGACGGCACTGGCAGCTACAGAGAAGGCCAAGGACCTCGCCAGCAAGGCGGCCACCAAGAAGCAGCAGC
AGCAGCAACAGTTTGTGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 15 .27 RPM |
| bodymap2_lung | 19 .06 RPM |
| bodymap2_breast | 12 .43 RPM |
| bodymap2_adipose | 16 .04 RPM |
| bodymap2_adrenal | 27 .14 RPM |
| bodymap2_skeletal_muscle | 3 .46 RPM |
| bodymap2_thyroid | 11 .96 RPM |
| bodymap2_prostate | 14 .39 RPM |
| bodymap2_colon | 15 .29 RPM |
| bodymap2_testis | 13 .71 RPM |
| bodymap2_brain | 7 .29 RPM |
| bodymap2_heart | 3 .71 RPM |
| bodymap2_white_blood_cells | 43 .08 RPM |
| bodymap2_lymph_node | 17 .60 RPM |
| bodymap2_ovary | 12 .57 RPM |
| bodymap2_kidney | 15 .65 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000005009 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000016443 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000006953 | ortholog_one2many | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000011762 | ortholog_one2many | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000001738 | ortholog_one2one | 12 retrogenes | |
| Myotis lucifugus | ENSMLUG00000007008 | ortholog_one2many | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000009046 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000004804 | ortholog_one2many | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000012226 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012714 | ortholog_one2one | 5 retrogenes | |
| Otolemur garnettii | ENSOGAG00000011455 | possible_ortholog | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000016086 | ortholog_one2one | 7 retrogenes | |
| Sus scrofa | ENSSSCG00000014042 | ortholog_one2one | 4 retrogenes | |
| Tupaia belangeri | ENSTBEG00000006445 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000009571 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_249 | 64.02 | 72.60 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_302 | 95.89 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_579 | 81.11 | 98.63 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_1550 | 87.25 | 68.04 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_hsap_2269 | 96.80 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_hsap_3518 | 96.64 | 57.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_hsap_3565 | 59.84 | 57.69 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000169230 retrocopies