RetrogeneDB ID: | retro_meug_666 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold15487:11635..12208(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PRELID1 | ||
Ensembl ID: | ENSMEUG00000001738 | ||
Aliases: | None | ||
Description: | PRELI domain containing 1 [Source:HGNC Symbol;Acc:30255] |
Percent Identity: | 72.77 % |
Parental protein coverage: | 88.43 % |
Number of stop codons detected: | 6 |
Number of frameshifts detected | 0 |
Parental | YPNPYSKHVLTEDIVHREVTPDQKLLSRRLLTKTNRMPRWAERFFPANVAHSVYILEDSIVDPQNQTMTT |
.PNP.S..VLTEDIVH.EVTPDQKLLSR.LLTK..RMP..A.RFFPANV.H.VYILE.....P.NQ..T. | |
Retrocopy | FPNP*SRRVLTEDIVHHEVTPDQKLLSRQLLTKISRMPHCAYRFFPANVTHLVYILENCVMYP*NQNITA |
Parental | FTWNINHARLMVVEERCVYCVNPENSGWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTKTIKGFEYI |
FTWNINHA.LMVVEE...Y.V..E.S..TEI.REAW..SSLF.VSRAV.EFGLARFKSNV.KTIKGFE.I | |
Retrocopy | FTWNINHAQLMVVEEI*LYSVDHESSSLTEI*REAWFFSSLFVVSRAV*EFGLARFKSNVIKTIKGFE*I |
Parental | LAKLQGEAPSKTLVETAKEATEKAKETALAATEKAKDLASKAATKKQQQQQ |
LAKLQGE..SKTLVETAK.ATEK.KETALAA...AK.L.SK...KKQQQQ. | |
Retrocopy | LAKLQGETHSKTLVETAKKATEKVKETALAAAKEAKGLQSKVTSKKQQQQE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |