Parental gene: | RNASEH1, ENSG00000171865 |
| Aliases: | RNASEH1, H1RNA, RNH1 |
| Description: | ribonuclease H1 [Source:HGNC Symbol;Acc:18466] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 2:3592382..3606206(-) |
>ENSG00000171865
ATGAGCTGGCTTCTGTTCCTGGCCCACAGAGTCGCCTTGGCCGCCTTGCCCTGCCGCCGCGGCTCTCGCGGGTTCGGGAT
GTTCTATGCCGTGAGGAGGGGCCGCAAGACCGGGGTCTTTCTGACCTGGAATGAGTGCAGAGCACAGGTGGACCGGTTTC
CTGCTGCCAGATTTAAGAAGTTTGCCACAGAGGATGAGGCCTGGGCCTTTGTCAGGAAATCTGCAAGCCCGGAAGTTTCA
GAAGGGCATGAAAATCAACATGGACAAGAATCGGAGGCGAAAGCCAGCAAGCGACTCCGTGAGCCACTGGATGGAGATGG
ACATGAAAGCGCAGAGCCGTATGCAAAGCACATGAAGCCGAGCGTGGAGCCGGCGCCTCCAGTTAGCAGAGACACGTTTT
CCTACATGGGAGACTTCGTCGTCGTCTACACTGATGGCTGCTGCTCCAGTAATGGGCGTAGAAGGCCGCGAGCAGGAATC
GGCGTTTACTGGGGGCCAGGCCATCCTTTAAATGTAGGCATTAGACTTCCTGGGCGGCAGACAAACCAAAGAGCGGAAAT
TCATGCAGCCTGCAAAGCCATTGAACAAGCAAAGACTCAAAACATCAATAAACTGGTTCTGTATACAGACAGTATGTTTA
CGATAAATGGTATAACTAACTGGGTTCAAGGTTGGAAGAAAAATGGGTGGAAGACAAGTGCAGGGAAAGAGGTGATCAAC
AAAGAGGACTTTGTGGCACTGGAGAGGCTTACCCAGGGGATGGACATTCAGTGGATGCATGTTCCTGGTCATTCGGGATT
TATAGGCAATGAAGAAGCTGACAGATTAGCCAGAGAAGGAGCTAAACAATCGGAAGACTGA
ATGAGCTGGCTTCTGTTCCTGGCCCACAGAGTCGCCTTGGCCGCCTTGCCCTGCCGCCGCGGCTCTCGCGGGTTCGGGAT
GTTCTATGCCGTGAGGAGGGGCCGCAAGACCGGGGTCTTTCTGACCTGGAATGAGTGCAGAGCACAGGTGGACCGGTTTC
CTGCTGCCAGATTTAAGAAGTTTGCCACAGAGGATGAGGCCTGGGCCTTTGTCAGGAAATCTGCAAGCCCGGAAGTTTCA
GAAGGGCATGAAAATCAACATGGACAAGAATCGGAGGCGAAAGCCAGCAAGCGACTCCGTGAGCCACTGGATGGAGATGG
ACATGAAAGCGCAGAGCCGTATGCAAAGCACATGAAGCCGAGCGTGGAGCCGGCGCCTCCAGTTAGCAGAGACACGTTTT
CCTACATGGGAGACTTCGTCGTCGTCTACACTGATGGCTGCTGCTCCAGTAATGGGCGTAGAAGGCCGCGAGCAGGAATC
GGCGTTTACTGGGGGCCAGGCCATCCTTTAAATGTAGGCATTAGACTTCCTGGGCGGCAGACAAACCAAAGAGCGGAAAT
TCATGCAGCCTGCAAAGCCATTGAACAAGCAAAGACTCAAAACATCAATAAACTGGTTCTGTATACAGACAGTATGTTTA
CGATAAATGGTATAACTAACTGGGTTCAAGGTTGGAAGAAAAATGGGTGGAAGACAAGTGCAGGGAAAGAGGTGATCAAC
AAAGAGGACTTTGTGGCACTGGAGAGGCTTACCCAGGGGATGGACATTCAGTGGATGCATGTTCCTGGTCATTCGGGATT
TATAGGCAATGAAGAAGCTGACAGATTAGCCAGAGAAGGAGCTAAACAATCGGAAGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 7 .98 RPM |
| bodymap2_lung | 5 .78 RPM |
| bodymap2_breast | 16 .63 RPM |
| bodymap2_adipose | 22 .48 RPM |
| bodymap2_adrenal | 21 .00 RPM |
| bodymap2_skeletal_muscle | 10 .91 RPM |
| bodymap2_thyroid | 19 .43 RPM |
| bodymap2_prostate | 9 .02 RPM |
| bodymap2_colon | 10 .38 RPM |
| bodymap2_testis | 12 .73 RPM |
| bodymap2_brain | 18 .80 RPM |
| bodymap2_heart | 13 .42 RPM |
| bodymap2_white_blood_cells | 10 .53 RPM |
| bodymap2_lymph_node | 12 .24 RPM |
| bodymap2_ovary | 15 .25 RPM |
| bodymap2_kidney | 11 .83 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000008547 | ortholog_one2many | 6 retrogenes | |
| Callithrix jacchus | ENSCJAG00000035450 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000012674 | ortholog_one2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000003610 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000014475 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000014491 | ortholog_many2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015400 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000025873 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000011614 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000002070 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000013051 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_300 | 72.82 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_1814 | 85.23 | 91.26 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000171865 retrocopies