Parental gene:

C6orf106, ENSG00000196821

Aliases:C6orf106, FP852, dJ391O22.4
Description:chromosome 6 open reading frame 106 [Source:HGNC Symbol;Acc:21215]
Organism:Human (Homo sapiens)
Coordinates:6:34555064..34664636(-)


>ENSG00000196821
ATGGAGGGCATGGACGTAGACCTGGACCCGGAGCTGATGCAGAAGTTCAGCTGCCTGGGCACCACCGACAAGGACGTGCT
CATCTCCGAGTTCCAGAGGCTGCTCGGCTTCCAGCTCAATCCTGCCGGTTGCGCCTTCTTCCTGGACATGACCAACTGGA
ACCTACAAGCAGCAATTGGCGCCTATTATGACTTTGAGAGCCCAAACATCAGTGTGCCCTCTATGTCCTTTGTTGAAGAT
GTCACCATAGGAGAAGGGGAGTCAATACCTCCGGATACTCAGTTTGTAAAAACATGGCGGATCCAGAATTCTGGGGCAGA
GGCCTGGCCTCCAGGGGTTTGTCTTAAATATGTCGGGGGAGACCAATTTGGACATGTGAACATGGTGATGGTGAGATCGC
TAGAGCCCCAAGAGATTGCAGATGTCAGCGTCCAGATGTGCAGCCCCAGCAGAGCAGGAATGTATCAGGGACAGTGGCGG
ATGTGCACTGCTACAGGACTCTACTATGGAGATGTCATCTGGGTGATTCTCAGTGTGGAGGTGGGTGGACTTTTAGGAGT
AACGCAGCAGCTGTCATCTTTTGAAACGGAGTTCAACACACAGCCGCATCGTAAGGTAGAAGGAAACTTCAACCCTTTTG
CCTCTCCCCAAAAGAACCGACAATCAGATGAAAACAACTTAAAAGACCCTGGGGGCTCCGAGTTCGACTCGATCAGCAAA
AACACATGGGCTCCTGCTCCTGACACATGGGCTCCTGCTCCTGACCAAACTGAGCAAGACCAGAATAGACTGTCACAGAA
CTCTGTAAATCTGTCTCCCAGCAGTCACGCAAACAACTTATCAGTAGTGACTTACAGTAAGGGGCTCCATGGGCCTTACC
CCTTCGGCCAGTCTTAA

Library Parental gene expression (RPM)
bodymap2_liver 148 .42 RPM
bodymap2_lung 215 .37 RPM
bodymap2_breast 237 .08 RPM
bodymap2_adipose 198 .34 RPM
bodymap2_adrenal 113 .95 RPM
bodymap2_skeletal_muscle 406 .41 RPM
bodymap2_thyroid 227 .82 RPM
bodymap2_prostate 141 .99 RPM
bodymap2_colon 150 .59 RPM
bodymap2_testis 160 .74 RPM
bodymap2_brain 121 .91 RPM
bodymap2_heart 238 .28 RPM
bodymap2_white_blood_cells 178 .47 RPM
bodymap2_lymph_node 146 .04 RPM
bodymap2_ovary 110 .73 RPM
bodymap2_kidney 153 .72 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000034493 ortholog_one2one 1 retrogene
retro_btau_1343,
Callithrix jacchus ENSCJAG00000015304 ortholog_one2one 1 retrogene
retro_cjac_2788,
Gorilla gorilla ENSGGOG00000000388 ortholog_one2one 1 retrogene
retro_ggor_1653,
Microcebus murinus ENSMICG00000013442 ortholog_one2one 1 retrogene
retro_mmur_1615,
Macaca mulatta ENSMMUG00000022824 ortholog_one2one 1 retrogene
retro_mmul_2155,
Nomascus leucogenys ENSNLEG00000008387 ortholog_one2one 2 retrogenes
retro_nleu_1933, retro_nleu_2739,
Otolemur garnettii ENSOGAG00000011264 ortholog_one2one 1 retrogene
retro_ogar_3245,
Ochotona princeps ENSOPRG00000009350 ortholog_one2one 1 retrogene
retro_opri_559,
Pongo abelii ENSPPYG00000016519 ortholog_one2one 2 retrogenes
retro_pabe_1265, retro_pabe_1928,
Pan troglodytes ENSPTRG00000018068 ortholog_one2one 1 retrogene
retro_ptro_1564,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2137 76.75 89.93
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Download FASTA sequences of all ENSG00000196821 retrocopies