Parental gene:

C6ORF106, ENSPTRG00000018068

Aliases:None
Description:Chromosome 6 open reading frame 106 [Source:UniProtKB/TrEMBL;Acc:K7DPL6]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:6:35021023..35089154(-)


>ENSPTRG00000018068
AACCTACAAGCAGCAATTGGCGCCTATTATGACTTTGAGAGCCCAAACATCAGTGTGCCCTCTATGTCCTTTGTTGAAGA
TGTCACCATAGGAGAAGGGGAGTCAATACCTCCGGATACTCAGTTTGTAAAAACATGGCGGATCCAGAATTCTGGGGCAG
AGGCCTGGCCTCCAGGGGTTTGTCTTAAATATGTCGGGGGAGACCAATTTGGACATGTGAACATGGTGATGGTGAGATCG
CTAGAGCCCCAAGAGATTGCAGATGTCAGCGTCCAGATGTGCAGCCCCAGCAGAGCAGGAATGTATCAGGGACAGTGGCG
GATGTGCACTGCTACAGGACTCTACTATGGAGATGTCATCTGGGTGATTCTCAGTGTGGAGGTGGGTGGACTTTTAGGAG
TAACGCAGCAGCTGTCATCTTTTGAAACGGAGTTCAACACACAGCCGCATCGTAAGGTAGAAGGAAACTTCAACCCTTTT
GCCTCTCCCCAAAAGAACCGACAATCAGATGAAAACAACTTAAAAGACCCTGGGGGCTCCGAGTTCGACTCGATCAGCAA
AAACACATGGGCTCCTGCTCCTGACACATGGGCTCCTGCTCCTGACCAAACTGAGCAAGACCAGAATAGACTGTCACAGA
ACTCTGTAAATCTGTCTCCCAGCAGTCACGCAAACAACTTATCAGTAGTGACTTACAGTAAGGGGCTCCATGGGCCTTAC
CCCTTCGGCCAGTCTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 76 .40 RPM
SRP007412_cerebellum 151 .53 RPM
SRP007412_heart 84 .26 RPM
SRP007412_kidney 73 .56 RPM
SRP007412_liver 68 .02 RPM
SRP007412_testis 110 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000034493 ortholog_one2one 1 retrogene
retro_btau_1343,
Callithrix jacchus ENSCJAG00000015304 ortholog_one2one 1 retrogene
retro_cjac_2788,
Homo sapiens ENSG00000196821 ortholog_one2one 1 retrogene
retro_hsap_2137,
Gorilla gorilla ENSGGOG00000000388 ortholog_one2one 1 retrogene
retro_ggor_1653,
Microcebus murinus ENSMICG00000013442 ortholog_one2one 1 retrogene
retro_mmur_1615,
Macaca mulatta ENSMMUG00000022824 ortholog_one2one 1 retrogene
retro_mmul_2155,
Nomascus leucogenys ENSNLEG00000008387 ortholog_one2one 2 retrogenes
retro_nleu_1933, retro_nleu_2739,
Otolemur garnettii ENSOGAG00000011264 ortholog_one2one 1 retrogene
retro_ogar_3245,
Ochotona princeps ENSOPRG00000009350 ortholog_one2one 1 retrogene
retro_opri_559,
Pongo abelii ENSPPYG00000016519 ortholog_one2one 2 retrogenes
retro_pabe_1265, retro_pabe_1928,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1564 69.86 87.76
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Download FASTA sequences of all ENSPTRG00000018068 retrocopies