Parental gene:

C6orf106, ENSPPYG00000016519

Aliases:None
Description:chromosome 6 open reading frame 106 [Source:HGNC Symbol;Acc:21215]
Organism:Orangutan (Pongo abelii)
Coordinates:6:34586258..34701815(-)


>ENSPPYG00000016519
ATGGAGGGCATGGACGTGGACCTGGACCCGGAGCTGATGCAGAAGTTCAGCTGCCTGGGCACCACCGACAAGGACGTGCT
CATCTCCGAGTTCCAGAGGCTGCTCGGCTTCCAGCTCAATCCTGCCGGTTGCGCCTTCTTCCTGGACATGACCAATTGGA
ACCTACAAGCAGCAATTGGCGCCTATTATGACTTTGAGAGCCCAAACATCAGTGTGCCCTCTATGTCCTTTGTTGAAGAT
GTCACCATAGGAGAAGGGGAGTCAATACCTCCGGATACTCAGTTTGTAAAAACATGGCGGATCCAGAATTCTGGGGCAGA
GGCCTGGCCTCCAGGGGTTTGTCTTAAATATGTCGGGGGAGACCAATTTGGACATGTGAACATGGTGATGGTGAGATCGC
TAGAGCCCCAAGAGATTGCAGATGTCAGCGTCCAGATGTGCAGCCCCAGCAGAGCAGGAATGTATCAGGGACAGTGGCGG
ATGTGCACTGCTACAGGACTCTACTATGGAGATGTCATCTGGGTGATTCTCAGTGTGGAGGTGGGTGGACTTTTAGGAGT
AACGCAGCAGCTGTCATCTTTTGAAACGGAGTTCAACACACAGCCGCATCGTAAGGTGGAAGGAAACTTCAACCCTTTTG
CCTCTCCCCAAAAGAACCGACAGTCAGATGAAAACAACTTAAAAGACCGTGGGGGCTCCGAGTTCGACTCGATCAGCAAA
AACACATGGGCTCCTGCTCCTGACACATGGGCTCCTGCTCCTGACCAAACTGAGCAAGACCAGAATAGACTGTCACAGAA
CTCTGTAAATCTGTCTCCCAGCAGTCACGCAAACAACTTATCAGTAGTGACCTACAGTAAGGGGCTCCATGGGCCTTACC
CCTTCGGCCAGTCTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 220 .17 RPM
SRP007412_cerebellum 220 .83 RPM
SRP007412_heart 60 .33 RPM
SRP007412_kidney 111 .84 RPM
SRP007412_liver 75 .04 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000034493 ortholog_one2one 1 retrogene
retro_btau_1343,
Callithrix jacchus ENSCJAG00000015304 ortholog_one2one 1 retrogene
retro_cjac_2788,
Homo sapiens ENSG00000196821 ortholog_one2one 1 retrogene
retro_hsap_2137,
Gorilla gorilla ENSGGOG00000000388 ortholog_one2one 1 retrogene
retro_ggor_1653,
Microcebus murinus ENSMICG00000013442 ortholog_one2one 1 retrogene
retro_mmur_1615,
Macaca mulatta ENSMMUG00000022824 ortholog_one2one 1 retrogene
retro_mmul_2155,
Nomascus leucogenys ENSNLEG00000008387 ortholog_one2one 2 retrogenes
retro_nleu_1933, retro_nleu_2739,
Otolemur garnettii ENSOGAG00000011264 ortholog_one2one 1 retrogene
retro_ogar_3245,
Ochotona princeps ENSOPRG00000009350 ortholog_one2one 1 retrogene
retro_opri_559,
Pan troglodytes ENSPTRG00000018068 ortholog_one2one 1 retrogene
retro_ptro_1564,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1265 75.41 81.54
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2. retro_pabe_1928 78.01 93.96
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Download FASTA sequences of all ENSPPYG00000016519 retrocopies